| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4968 |
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| Symbol | |
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| ID | 6279876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1105331 |
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| End bp | 1106425 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616054 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001888702 |
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| Protein GI | 187919671 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0985864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.213163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAGA TCAAACGGGG CAGAAGGCAG GCCATCAAGA CACTCGGCGC CGCACTCGCG
GCATCCACCT TGCCGATGCC GTTCATCAAT CTGCGCGCGC AGGAACACAA CTTCAGCGGC
AAGACGTTGC GCCTGTTGAC CTGGTCGGAC GACACCGGCG CGGCCGCGCT GCGCAATATC
GCCGCCACCT TCACCGCGAA AACCGGCGCC AAAGTCATCG CCGACCGCGC CGACGGCACC
TCCGGCATGG TCGCGAAGGT CAAGGCCGCA GGCGACCGCC CGACCTACGA CGTCATCACC
CTGGCCGGCG TCGGCGCCGC CGGTCTCGGC GATGCAGGTC TGCTGATGAA GCCCGATCTG
GACAAACTGC CGAATCTGAA AGACGTCGCG CCGCAGTACC GCACGGGCGC GAACGGCTTC
GGCGTGGGCT ATCTGCTGTG GTCGGACGGC TTGATCTACA ACACGTCGAC GGTCAAGACC
GCGCCCGCAT CGTACGAAGC CCTGTGGGAT CCCAAATACG CCGGACGCCT GTTCCTGCCG
CCGCCCGAGT GGGCCGAAGC GGTCGACCTC GCGATCATCG CCGCGAAGAT GAACGGCGGC
TCGCAGCAGA ACATCGAGCC GGGCTTCAAG AAACTGATGC AGCTGAAAGA TCGCGTGATG
ACGCTCGGCG AGAACCCGAA CCAGGTGGCG GATCTGTTCC GTACCGGCTC GCTGGATATC
GGCGGCATCT ATTCACCGGC GTTCTTCCCC GACCAGATCC GCAAGCCCGA GTACAAGATG
GGCGTGACCT ACGGCATGAA AGAAGGCTTC GCCACTCAGC TGATGTTCAC CGTGATCCCG
AAATCGCATC CGGGCGACAG CGATCTGATC CACGCCTTCA TCAACCATTC GCTCGACGCC
GGCGTGCAAG GCCGCATGGC CGCCGACGTG CTGAACGGCC CGGTGAATTC GAAAGCGGTG
ATACCCGCCG AAAGCCGCGC GTTCGTGCCG AGCCCGCAGC AGATCGCCGA GAAAGCCGTG
CTGCATGACG ACAAAGCGCT CGCCGTGGTG CAGCCAGCGT GGATCAAGCG TTACACCGAA
ATCTTCGCGG CATGA
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| Protein sequence | MQEIKRGRRQ AIKTLGAALA ASTLPMPFIN LRAQEHNFSG KTLRLLTWSD DTGAAALRNI
AATFTAKTGA KVIADRADGT SGMVAKVKAA GDRPTYDVIT LAGVGAAGLG DAGLLMKPDL
DKLPNLKDVA PQYRTGANGF GVGYLLWSDG LIYNTSTVKT APASYEALWD PKYAGRLFLP
PPEWAEAVDL AIIAAKMNGG SQQNIEPGFK KLMQLKDRVM TLGENPNQVA DLFRTGSLDI
GGIYSPAFFP DQIRKPEYKM GVTYGMKEGF ATQLMFTVIP KSHPGDSDLI HAFINHSLDA
GVQGRMAADV LNGPVNSKAV IPAESRAFVP SPQQIAEKAV LHDDKALAVV QPAWIKRYTE
IFAA
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