| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4962 |
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| Symbol | |
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| ID | 6277785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1100029 |
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| End bp | 1100685 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616048 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001888696 |
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| Protein GI | 187919665 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0311986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0537626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAAT TCACGCTGTG GGACATTGCC CGCAATCTGT TGCTCGCCGC GCGCTGGACG
GTGCTGCTGT CGCTGATCGC GTTTGTCGGC GGCGGTATCG TCGGGCTGAT TCTGCTCGCG
ATGCGCGTGT CGCCGATCGC CTGGCTGCGG CGTATCGTCG TGGTCTATGT GGAGGTGTTT
CAGGGCACGC CGCTGCTGAT GCAACTCTTC CTGGCGTTTT TCGGCTTGCC GCTGCTCGGC
GTCGATGTGT CGCCGTGGGT CGCGGCCACT GTCACCTTGA CGCTCTACAC GAGCGCGTAT
CTGGTCGATA TCTGGCGCGG CTGTGTGGAA GCCGTGCCGC GCGGCCAGTG GTCTGCGGGC
GCGAGCCTCG GCATGACGTT CGGCCAACAG TTGCGTTACA TCGTGTGGCC GCAGGCGCGC
AAAATCGCGG TGGCGCCGAC GGTCGGTTTT CTCGTGCAGG TGGTGAAAAG CACGGCGCTC
GCGTCGATCA TCGGCTTCAC GGAATTGACC AAGACCGGCA CCATGATCAC CAACGCCGCG
TTCCGCCCAT TCCCGATCTA CGGCATGGTC GCGATGATCT ACTTCGCGAT GTGCTTCCCG
CTGACGTGGT ACGCGCGGGT GCTGGAGAAA CGGCAGAAGG TAGGTCAACA TCGTTGA
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| Protein sequence | MVEFTLWDIA RNLLLAARWT VLLSLIAFVG GGIVGLILLA MRVSPIAWLR RIVVVYVEVF
QGTPLLMQLF LAFFGLPLLG VDVSPWVAAT VTLTLYTSAY LVDIWRGCVE AVPRGQWSAG
ASLGMTFGQQ LRYIVWPQAR KIAVAPTVGF LVQVVKSTAL ASIIGFTELT KTGTMITNAA
FRPFPIYGMV AMIYFAMCFP LTWYARVLEK RQKVGQHR
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