Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4956 |
Symbol | |
ID | 6280078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1092807 |
End bp | 1093784 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642616042 |
Product | Peptidase M23 |
Protein accession | YP_001888690 |
Protein GI | 187919659 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.388458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0405344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAGC GCTTCGACAA AACAATGATG GCCAGTCTGG CTGGCGTATG GGTCGCGCTG GCGGTCGGCG GTTGTGCGAA CGTGGGGCAG CAGGGCGCCC AGACAGGCGC GGCAGCGGGC GCGGCGCCTG CGTCCAGTGT GCCGGCGGCT AGCGCGACTG CATCCGATGC GACGTCGGCC GCGCCGCCCG GCATCAGCGC CGAGCAGAGC GCGCTGCTCA AGAAAGCGCC GCCGCTCGTG TATCGCGTCA AGCGTGGCGA CAGCCTGGCG CGCATCGCGC AGCATCATCA TTGCAGCGTA AAGCAGTTGC AAGCCTGGAA TGGATTGAAT GCGTCCTCGC GCTTGAAGTT GGGCCAGGTC TTGCACGTCG CGTCGCCGGA AACGGTGCGC GCGGTGAACG CGGCCAATGC CGCGGCGAAA GCCGTGGCGG CATCCACGCC GGCTGCTTCG GTCGCGGCGC GGCAGGCGGG GGCAACCGCG TCGGGTGCTA CGCAGCCACC TTCGCAATCG GCGCAGGCTG CGCAATCGGC GCAGTCCGCG CAGTCGCCGG CGCTCAGCGC CGCCGAAGCA CGCGAAGTGG CGCAACAAAC CGCGCGGCAC GCGAACGGCG TAGCGCTGGC CTGGCCCGCG GGCGGACGTG TGGTCGAAGG TTTCCAGCCG GGCGAAACAC GCGGCATTGA AATCGGCGGC AAGCCGGGCG ATCCGGTGCG CGCCGCCGCC GACGGTAAGG TGATGTACGC CGGCACGGGT CTGAACAGCT ACGGCAGTCT GATCATCGTC CAGCACAACA AGGACTTTCT GACCGCCTAT TCGCACAACC GCAAGCTGCT GGTCAAAACC GGCGACATCG TCGCGCAGGG ACAGCAGATC GCCGAGATGG GCGACGAAAA CAACTCGCGC GTTTCCGTGG GCTTCGAGTT GCGCCGCGAC GGCAAACCGA TCGATCCGAT GCCGTACCTG CCGCAAGGAC GCGGCTAG
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Protein sequence | MGKRFDKTMM ASLAGVWVAL AVGGCANVGQ QGAQTGAAAG AAPASSVPAA SATASDATSA APPGISAEQS ALLKKAPPLV YRVKRGDSLA RIAQHHHCSV KQLQAWNGLN ASSRLKLGQV LHVASPETVR AVNAANAAAK AVAASTPAAS VAARQAGATA SGATQPPSQS AQAAQSAQSA QSPALSAAEA REVAQQTARH ANGVALAWPA GGRVVEGFQP GETRGIEIGG KPGDPVRAAA DGKVMYAGTG LNSYGSLIIV QHNKDFLTAY SHNRKLLVKT GDIVAQGQQI AEMGDENNSR VSVGFELRRD GKPIDPMPYL PQGRG
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