| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4954 |
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| Symbol | |
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| ID | 6278909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1090377 |
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| End bp | 1091639 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642616040 |
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| Product | Gluconate 2-dehydrogenase (acceptor) |
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| Protein accession | YP_001888688 |
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| Protein GI | 187919657 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.353681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0290114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTC GACCGATCAC CTTGCGCCGC GCGCTATTGC TGCTCGGTGC GATGCTTACG
CTGAGCGCGT GCGGCGGCAA GCACGACGAC ACCGGCGCGC TGGCCGCCGC CGCCGCATTG
GGTCCGCAAT CCACCGCCGC CGACCCGCTC GCGCGCGGCC GCTACCTCGT CAAAGCCGCC
GACTGCGCCG CCTGTCACAC CACGGCCGAC GGCGCGCCGT TCGCCGGCGG CGTGAAGCTG
GCTTCGCCGT TCGGCACCTT CTACGGCACC AACATCACGC CCGACAAGGA CCACGGCATC
GGCAACTGGA GCGCGGACGA TCTGTACAAG GCGCTGCACG ACGGCGTCAC GCCGGACAAG
CAACTCTATC CGGCGATGCC GTATACGTCG TACCGCCAGT TGTCGCGCGC GGACAGCGAT
GCGATCTACG CGTACCTGAT GGCGCAGAAG CCGGCCGCGG TGGCGAACCA CGAGCCCGAC
CTGTCGTTCC CGTTCAACCT GCGTTTCGGC GTGCGTTTCT GGAACTGGGT GTTCCTGAAA
GACGCGTTGC CGGATGCGTC GACGGGACAG ACAGCGGAGT GGAATCGCGG CCGCTATCTG
GCGAGCGCGC TCGGCCATTG CGCCGAGTGT CATACGCCGC GCGGCACGTT CGGCCAGCTC
GACGGCGCGA AGCCGCTAAC CGGCGCGGCG CTCGGCCGGA TCGCGGCGCC GGATATCACG
CCGCACGGTC TCGCGGCGCG CGGCTGGAGC GCCGCCGATC TGCAGACCTT CTTCGCGACC
GGCATCGCGC CGCAGGGCTC GGCATTCGGC GAGATGTACC CGGTAGTGCA TCTGAGCAGC
CAGTACCTGA CGCACGACGA CCTGCGCGCC ATGTCGTCCT ATCTGCTCGG CGACCAGGCG
CCCGCGCCGC AACCGCTGCG GTCCGTTTCC GCTGACGCCG CTCAGCTCGA AGCAGGGCGC
AACGTGTATC TCGCCGTGTG CGCGGGCTGT CATGGTCTGA ACGGCGAAGG CAAGCCGCAT
GTCGCGGTGC CGATGCACGG CAATTCGACG CTGCGCCAAA GCGATGCCCA CAATCTGATC
GTGGCGATGC TCGACGGCAT CGGCGCGCAA GATTTTCCGG GCCTCGAACG GATGCAGGAG
ATGCCCGGCT TCGCCACGCA GCTCAGCGAT GCGGAACTCG CACAGCTCGC CAACTATCTG
CGCGCGACGT GGGGCGGTCA GCCTGCCGAT GTGACGGCGG ATGCGGTGAA AGCGCTGCGC
TGA
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| Protein sequence | MTIRPITLRR ALLLLGAMLT LSACGGKHDD TGALAAAAAL GPQSTAADPL ARGRYLVKAA
DCAACHTTAD GAPFAGGVKL ASPFGTFYGT NITPDKDHGI GNWSADDLYK ALHDGVTPDK
QLYPAMPYTS YRQLSRADSD AIYAYLMAQK PAAVANHEPD LSFPFNLRFG VRFWNWVFLK
DALPDASTGQ TAEWNRGRYL ASALGHCAEC HTPRGTFGQL DGAKPLTGAA LGRIAAPDIT
PHGLAARGWS AADLQTFFAT GIAPQGSAFG EMYPVVHLSS QYLTHDDLRA MSSYLLGDQA
PAPQPLRSVS ADAAQLEAGR NVYLAVCAGC HGLNGEGKPH VAVPMHGNST LRQSDAHNLI
VAMLDGIGAQ DFPGLERMQE MPGFATQLSD AELAQLANYL RATWGGQPAD VTADAVKALR
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