| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4951 |
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| Symbol | |
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| ID | 6277890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1085534 |
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| End bp | 1086289 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616037 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_001888685 |
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| Protein GI | 187919654 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.43451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.034179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCACAT CGCAAAGAAA GCAGCTGATA CTCGATGCGC TCAAGCGCAA CGGGCAAGTG
ATCGCCAAAA GTTTGAGCGC TGAATTCGAA GTCTCCGAGG ACACGATTCG CCGCGATCTG
CGCGAACTCG CCGCCGAAGG CCAGCTTCAG CGCGTGCATG GCGGCGCACT GCCGGCGTCG
CCGGCAGCGG TGGATTTTGC CGGGCGCGAG CGGATCGAAT CGGCGTCGAA GGCGGCGATC
GGGCGGGCGG CGGCGGGCAT GATCGCGCAC GGCCAGATTG CGTTCGTCGA CGGCGGCACG
ACGGCCGCGC AGCTGGCGCG TCATCTGCCG CGTGATTTGC AAGCGACGAT CGTCACGCAT
AGCCCGAGCG TCGCCGTCGA ACTCGCGGAG CATGCCGGGC TCGAGATCGT CATGATCGGC
GGCCGCCTGT TCAGGCATTC GATGGTCAAC GTCGGCGCCG CGGCCATCGA AACGCTCAGC
CACATTCGCG CGGACCTGTA TTTCATGGGC GTGACCGGCG TGCATCCGCA AGCGGGTCTG
AGCACCGGCG ACAGGGAAGA GGCCTACGTG AAACGCGCGT TCGCGGAACA CGCGGCGGAG
ACGGTGGTGC TGGCGTCGGC GGAAAAACTC AATGCGGCCT CGGCGTACAA GATCGCGGAC
GTGACAGCGG CCAGTGCGAT CGTCGTCGAA CGGAACACGG ATAAGGCGTT GACTTCGCCG
TTCGAAGCCT TAGGCATTAG CATTGTGCGC GCATAG
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| Protein sequence | MLTSQRKQLI LDALKRNGQV IAKSLSAEFE VSEDTIRRDL RELAAEGQLQ RVHGGALPAS
PAAVDFAGRE RIESASKAAI GRAAAGMIAH GQIAFVDGGT TAAQLARHLP RDLQATIVTH
SPSVAVELAE HAGLEIVMIG GRLFRHSMVN VGAAAIETLS HIRADLYFMG VTGVHPQAGL
STGDREEAYV KRAFAEHAAE TVVLASAEKL NAASAYKIAD VTAASAIVVE RNTDKALTSP
FEALGISIVR A
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