Gene Bphyt_4947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4947 
Symbol 
ID6280312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1081233 
End bp1082342 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content66% 
IMG OID642616033 
Producthypothetical protein 
Protein accessionYP_001888681 
Protein GI187919650 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0337117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0617497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGT CGCAATCCCG CCTGATCGAA CTCGATTTTT TTCGGGGGCT GGTCCTTCTG 
ATCATCGTCG TCGACCACAT CGGCGGCAGC ATTCTGTCGC GCGTCACGCT GCACGCCTAC
GCACTATGCG ATGCCGCCGA GGTGTTCGTG TTCCTCGGCG GCTTTGCGAC CGCCACGGCG
TACGCCGCGC TCGCCGAACG GCGCAACGAG ACGATCGCGC GCAGCCGCTT CCTGCGGCGC
TCGCTGGAAA TCTATCGCGC GTTCCTCGTC ACCGCCGCGC TGATGCTGCT GGTCAGCGCC
GTGCTCAGCG CGTTCAGCAT CGACGGCCCG AATCTCGCCA CCACCGATCT CGACGATCTG
ATGGACACCC CGCTCGCGGC GCTCGGCGAC ATTCTGCTGT TCCGCCGCCA GCCGTATCTG
GCTTCAGTGC TGCCCATGTA CGCGTTCTTC GCGCTGCTGG TGCCGATGAT CCTGCCGCTC
GCGCGCAGCA AGCCGTGGCT GCTGCTGGCC GGCAGCGTCG CGCTGTGGGC CGGCGCTCCC
GCTATCGTCG CCTACCTGCC CGCCGCGCCG GACATGCACT GGGATTTCAA TCCGTTCGCC
TGGCAACTGC TGTTCGTGCT CGGCGTGCTG GCCCGTTGCC AGCCGGTTTA TCAGCGCGCG
AGCGCGCACC GTCTGAGCTG GCTCGTCAGC CTGCTGGCGC TTGCGGTGGT CGCGGCGGCC
GCTTACTACA AGCTGTTTAT CGAGCACGAA CCGCTCGATG CCAGCCTGAA GCAAAACCTC
TCGTATCTGC GGGCTGTCAA TTTTCTCGCC ATCGCGTGGC TGGTCGCGAA TCTGATTCAG
TTCGGCTGGG CCAGAAAGCT CGCGCAATGG GCGCCGTGGG TCGGCGAGAT CGGCCGCAAA
GGGTTGCTGT GCTTCATCGC CGGCGCAGTG ATTTCGCTCG TGGTCGACTC CGTGCTGTAC
GCAGCGACGG ACGGCTATCT GAACTATCCG CTCGGACTGC TCGCGGATGC GATCGCGATC
GGCGCGCTGT TCGCGGTCGC GCTGGGCGTG GAGCCGCTCA AGCGTGCGGC CGGCCGCTTG
TATGGCGGGT GGCTGCGCAC GTCGCCCTGA
 
Protein sequence
MQKSQSRLIE LDFFRGLVLL IIVVDHIGGS ILSRVTLHAY ALCDAAEVFV FLGGFATATA 
YAALAERRNE TIARSRFLRR SLEIYRAFLV TAALMLLVSA VLSAFSIDGP NLATTDLDDL
MDTPLAALGD ILLFRRQPYL ASVLPMYAFF ALLVPMILPL ARSKPWLLLA GSVALWAGAP
AIVAYLPAAP DMHWDFNPFA WQLLFVLGVL ARCQPVYQRA SAHRLSWLVS LLALAVVAAA
AYYKLFIEHE PLDASLKQNL SYLRAVNFLA IAWLVANLIQ FGWARKLAQW APWVGEIGRK
GLLCFIAGAV ISLVVDSVLY AATDGYLNYP LGLLADAIAI GALFAVALGV EPLKRAAGRL
YGGWLRTSP