Gene Bphyt_4942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4942 
Symbol 
ID6279497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1074415 
End bp1075365 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content63% 
IMG OID642616028 
ProductDMSO reductase anchor subunit (DmsC) 
Protein accessionYP_001888676 
Protein GI187919645 
COG category[R] General function prediction only 
COG ID[COG3302] DMSO reductase anchor subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0743423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.111633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCG CATTCTCCGT GGTTTTTCTG ACCACTTTGA GCGGCGCGGC CCAAGGCCTG 
CTGATCGCGC TCGTCGGCGT GGAAACTGCC GCGCATCTGG GCCTGCTCGC TTCGCCCTCC
GGTGCGTTCT ATATCGCCGG CGCGGGCGTG TCGGTCGTAT TGGGCGGACT CGGGCTGATC
GCATCGTTTT TCCATCTCGG CCATCCCGAA CGCGCATGGC GCGCAATCGC CATGTGGCGG
ACCTCGTGGT TGTCGCGTGA ATGTTTGTGC CTGCCGGCGT TTCTTGCTTG CGCGTTTTTC
TATGGTGTCG CGCATTGGTT CGGCTCGCCG TGGTCGCTCG CGATCGGCTG GCTCGGCGTG
CTGGCGAGCG CCATGCTGTT CGTCTGCACG GCGATGATCT ACGCGTGCCT GCGCTTTCTG
CAGGAGTGGG CCACGCCGCT CACACTGGTG AACTTCACGC TGCTTGGCTG CGCGTCGGGC
TTCACATTGG CGACGGCTTT GAGCGCATGG TTCGCGCCCG AGTGGACCGT TGGACTCGCT
GTCTGCGCAT GCGTGCTGAC GCTCGCCGGC TGTGCGAGCC GCTCGGCGTC GCTCATGCGC
AATGCGCGCT TGCGGCCGAA GTCGACGGTG CAAAGCGCCA CCGGCATTCA CAATCCGAAA
CTGGTGCAGG TGTCGCGCGG TTTTACCGCC GGTGCGTTCA ATCTGCGCGA GTTCTTTCAC
GGCAAATCGG CGGGCACGCT GCGCAATGTC AAATGGGGTT TTCTCGCGAC GGCGTTTGTC
GCGCCGGTTT TGTTGCTGGC GTTAGGGGCG GGCCTGCATT CGATTGGCGT TTCGTTAGGG
CTGCTGGCTG CGGCGTGTCT CGTGCAGTAC GCGGGACTGG TGGCGGAGCG CTGGTTTTTC
TTTGCCGAAG CGAAGCATCC GCAGAATCTT TATTACGCGA GGGTGGGTTA G
 
Protein sequence
MNPAFSVVFL TTLSGAAQGL LIALVGVETA AHLGLLASPS GAFYIAGAGV SVVLGGLGLI 
ASFFHLGHPE RAWRAIAMWR TSWLSRECLC LPAFLACAFF YGVAHWFGSP WSLAIGWLGV
LASAMLFVCT AMIYACLRFL QEWATPLTLV NFTLLGCASG FTLATALSAW FAPEWTVGLA
VCACVLTLAG CASRSASLMR NARLRPKSTV QSATGIHNPK LVQVSRGFTA GAFNLREFFH
GKSAGTLRNV KWGFLATAFV APVLLLALGA GLHSIGVSLG LLAAACLVQY AGLVAERWFF
FAEAKHPQNL YYARVG