Gene Bphyt_4934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4934 
Symbol 
ID6277714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1064744 
End bp1066144 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content66% 
IMG OID642616020 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001888668 
Protein GI187919637 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.602259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.31234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCT GGACCGGGCG CTCGCTCACG GCTCGCACCA CGGTGCTGTT CGCGTCGATT 
GCGTGCGTGG TGATCGGCAC GCTCGGCGCG TATTTCTATC ACTCCGCCGA AGTGTCGCTG
CAACGTCGCG CCGACGTGGT GCTGACCGCC CGCGTCGAGC ATTTCAGCCG CATCGTGCGC
GATCTCTATT CGGTCGGCGA ACTGAAGAGC CGGCCATTGC TGTTCGAGAC CATGCTGGGC
GCTGAACAGG ACGTGCTGCT GTTTCGCCGT CCGGGCGAAG CGCCGTTCAT CGACGTGAAC
CCGGCGGGCG TGGCGGTGCC CGCGCTGCAA GCCGGTGTGG AGGGCCGCTT GCCGACCTTC
GCCGACGTTC GCCAGACGCG GTTGGCCAAC GGTGTGCCGG TGCATTGGGC GATCGCCACC
GCCAAAGCGC GCGAGGACGG CACCGAAGTC GAAGTGATCG CCGGCCACCC GATGACGGAG
GAAGTGCGCA TGCTGGCCGC GTACCGCGAT CGCATCGTGC TGGCCACGCT GATCGGCATG
CTGGCCGCGA CGCTGCTCGC CTGGTACGTG CTGCGGCGCG CGCTGCGTCC GGTTCGCGAG
ATTGCCACGC GGGCCGCGCA GATCAGTCCC ACGAGCCTGT CGGTGCGGCT CGACAGCGAG
GCGGCGCCAC TCGAATTGCG TCAGCTCACG CATGCGTTCA ACGCCATGCT CGAGCGTCTC
GCGGATGGTT ATCAGCGGCT CTCGCAGTTT TCCGCCGACC TGGCACACGA AATTCGCACG
CCGGTCGGCG CGTTGATCGG GCAGACGCAG GTGACGCTCG CGCGGATCCG CGAGCCCGAC
GAGTATCAGC AGGTGCTCGA ATCGAATCTC GAAGAACTGA GCCGCCTGAG CCATATCGCG
GAGAACATTC TGTTTCTCGC GCATGCGGAC CATGCGGCGC TTTCAGTGGA ACGCGAGCCG
GTCGATCTGC GCGAGGAACT CGTCAGGATC GCTGATTATT TCGAAGGTCC CGCCGACGAA
CGCGGCATGC GCTTCGTGGT CGAGGCCACG GGTGTGGCGT CGGCCAATCC GATGCTGTGC
CGCCGCGCGA TCAACAACCT GGTCGTCAAT GCCGTGCGTT ACGGGGCGAG CGATACGGTG
GTGCGTCTGC GTGGTACGCA GGACGAGGCG GGCGCCACCG TGGTGGTCGA AAACGACGGC
GCGCCGATTC CCGAAGAACA GCTAGGCCGC CTGTTCGATC GCTTCTATCG CGCGGACACG
GCGCGTAGCG CGTTCACCGA ATCGAGCGGC CTGGGTCTTG CGATCGTGAA GGCGATCATG
CATCTGCATG GCGGCACGGC GCGCGTGGTG TGTCCGGCGC CGGGCGTGGT GCGCTTCGAG
TTGCGCTTTC CGGGCGCTTA A
 
Protein sequence
MTFWTGRSLT ARTTVLFASI ACVVIGTLGA YFYHSAEVSL QRRADVVLTA RVEHFSRIVR 
DLYSVGELKS RPLLFETMLG AEQDVLLFRR PGEAPFIDVN PAGVAVPALQ AGVEGRLPTF
ADVRQTRLAN GVPVHWAIAT AKAREDGTEV EVIAGHPMTE EVRMLAAYRD RIVLATLIGM
LAATLLAWYV LRRALRPVRE IATRAAQISP TSLSVRLDSE AAPLELRQLT HAFNAMLERL
ADGYQRLSQF SADLAHEIRT PVGALIGQTQ VTLARIREPD EYQQVLESNL EELSRLSHIA
ENILFLAHAD HAALSVEREP VDLREELVRI ADYFEGPADE RGMRFVVEAT GVASANPMLC
RRAINNLVVN AVRYGASDTV VRLRGTQDEA GATVVVENDG APIPEEQLGR LFDRFYRADT
ARSAFTESSG LGLAIVKAIM HLHGGTARVV CPAPGVVRFE LRFPGA