Gene Bphyt_4928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4928 
Symbol 
ID6278313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1059385 
End bp1060437 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content56% 
IMG OID642616014 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_001888662 
Protein GI187919631 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.125922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.144923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA CTTACGCCTA TGCAGCGACC GACGCGACCG CGCCGCTCGC CCCGTTCGAA 
ATCCAGCGCC GCGAACTGCG CGCCCATGAC GTGCAGATGG AAGTTCTGTT TTGCGGTGTG
TGCCATTCCG ATTTGCATCA GGCGCGCAAC GAATGGAAGA ACACAGTGTT TCCGGTTGTA
CCGGGCCATG AGATTGTCGG CCGCGTGACC GCGGTGGGTC TGGACGTGAC GAAGTACAAG
GCTGGCGATC TGGTCGGCGT CGGCTGTCTG GTGGATTCAT GCCGCACGTG TGCGAGTTGC
AAGGAAGATC TCGAGCAGTA TTGCGAGAAC GGTTTTGTCG GCACGTATAA CGGCGTTGAT
CGAGTTGATG GGCAGACCAC TTACGGTGGT TATTCCACGC AGCTCGTCGT GGATGAAGCG
TTCACGCTGC GTGTGCCGGA GAATCTCGAT CCTGCGGGTG TTGCGCCGTT GCTGTGCGCG
GGGATCACGA CGTATTCGCC GCTGCGGACC TGGGGTGCTG GTCCTGGCAA GAAGGTGGGC
ATTGTCGGGC TTGGCGGCTT GGGGCATATG GGTGTGAAGC TCGCTCGCGC GATGGGTGCG
CATGTTGTGT TGTTCACGAC CTCGCCTTCC AAGATCGAAG ATGCGAAGCG GTTGGGTGCG
CATGAAGTTG TGATTTCGAA GAATGCCGGG GAAATGGAAG CGCATTTGAA TAGCTTCGAT
CTGATCGTGA ATACGGTTGC TGCTCAGCAT GATTTGAATC CGTTTTTGAA TCTGCTCAAG
CGGGATGGGA CTATGACGCT GGTTGGTGCG CCGGAGCATG ATCATCCGTC GCCGCAAGTG
TTCAATCTCA TTTTCAAGCG TCGCCGGTTG GCTGGGTCGT TGATTGGGGG GATCGCTGAG
ACGCAGGAAA TGTTGGACTT CTGCGGGGAA CATGGGATTA CTTCTGATGT TGAGGTGATT
CCTATGCAGG GGATCAATGA GGCTTTTGAA CGGATGCTGA AGAGTGATGT TAAGTATCGG
TTTGTGATTG ATCTGGATTC CTTGCGGAAG TGA
 
Protein sequence
MSTTYAYAAT DATAPLAPFE IQRRELRAHD VQMEVLFCGV CHSDLHQARN EWKNTVFPVV 
PGHEIVGRVT AVGLDVTKYK AGDLVGVGCL VDSCRTCASC KEDLEQYCEN GFVGTYNGVD
RVDGQTTYGG YSTQLVVDEA FTLRVPENLD PAGVAPLLCA GITTYSPLRT WGAGPGKKVG
IVGLGGLGHM GVKLARAMGA HVVLFTTSPS KIEDAKRLGA HEVVISKNAG EMEAHLNSFD
LIVNTVAAQH DLNPFLNLLK RDGTMTLVGA PEHDHPSPQV FNLIFKRRRL AGSLIGGIAE
TQEMLDFCGE HGITSDVEVI PMQGINEAFE RMLKSDVKYR FVIDLDSLRK