Gene Bphyt_4927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4927 
Symbol 
ID6278340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1057707 
End bp1058663 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content61% 
IMG OID642616013 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001888661 
Protein GI187919630 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.364408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.198885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGACA GAATAACTGC AATGCGCACC TTCATCCGAA TCGTGGACAC CAACAGCTTC 
ACCCGCGCAG CGGAATCACT AAACATTCCG CGCGCCACGG CGACCACCAT CGTCCAGAAC
CTGGAAGCCC TGCTAGGCAC AGTCCTTCTA GCCCGCACGA CGCGGCGCTT AAGCGTCACC
CCTGAAGGCG CGGCCTACTA CGAGCGCTGC ACGCAAATTC TCGCCGACAT CGACGAAATG
GAAGCCAGCA TCCGTCACGC GACGGACAAC CTGACCGGCC GTCTGCGCAT CGAAATGCCC
GGCGCTGTAG CCAGCGCCAT CGTGCTGCCG GCTCTCGACG ACTTCCATAC CCGTTACCCG
AACCTCGATC TCGCAATCGG TATCAGCAAC CGCACAGTCG ACCTGATCAC CGAAGCCATC
GACTGCAGCA TCCAGCTCGG CGAATTGCCA GACTCGAATC TCGTCGCGCG CCAACTCGGC
ACGCTCGAAC ACGTGACCTG CGCGAGCCCA GCCTACCTGG CCCGCTACGG CACGCCCACG
GATCTCGACG ATTTGCGTGG CCATTCAGCC GTCAATTGCA TGTCGCCGCA TAACGGCCGC
GAAGTGGACT TCGATTTCGA AGTGAACGGC GAAGCGCAAA ACGTGAAGGT GAAAGGCTTC
GTCAAAGTCA GCGACGAACA GGCCTATCTC ACCTGCGGCC TGCAAGGCCT CGGCTTGATC
CAGCCCGCGC GGATCGCCGC GCAACCGTAT CTCGACTCGG GACTATTGCG CGAAGTCATG
CCGCAATGGA AACCGGTGCC GATGCCGGTC TCGGTCGCTT ATGTAAAGAA TCGCCGCGTG
TCGCCACGCG TGCGCGCGTT CGTGGATTGG CTGGCGGAAT TGTTCGAGAA AGCGGAGCAC
GTCGATCAGG ATCTCTCGCG TGTCCGTCAA TTGCTGCGCG GCCTGCATCC CGCCTGA
 
Protein sequence
MIDRITAMRT FIRIVDTNSF TRAAESLNIP RATATTIVQN LEALLGTVLL ARTTRRLSVT 
PEGAAYYERC TQILADIDEM EASIRHATDN LTGRLRIEMP GAVASAIVLP ALDDFHTRYP
NLDLAIGISN RTVDLITEAI DCSIQLGELP DSNLVARQLG TLEHVTCASP AYLARYGTPT
DLDDLRGHSA VNCMSPHNGR EVDFDFEVNG EAQNVKVKGF VKVSDEQAYL TCGLQGLGLI
QPARIAAQPY LDSGLLREVM PQWKPVPMPV SVAYVKNRRV SPRVRAFVDW LAELFEKAEH
VDQDLSRVRQ LLRGLHPA