| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4920 |
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| Symbol | |
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| ID | 6278114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1047140 |
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| End bp | 1048249 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616006 |
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| Product | type VI secretion-associated protein, ImpA family |
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| Protein accession | YP_001888654 |
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| Protein GI | 187919623 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.662122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0188154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATTA ATCTAGACAT CTTGCTGGCT CCGCTCAGCG AAACCTCGCC CTGTGGCGAA
GATCTGCTGT TCTCAGCCGA TTTCGATGCG ATCCAGCACG CGCGCCGTTT CGAAGACCCG
TCGCTGGATC AGGGCGAATG GGTCACGGAG ATCAAGGAGG CGGATTGGGC GTTCGTGGTC
GAGCGTTCGG GCAGCTTGCT GCAAACGCAG ACCAAAGATT TGCGTCTCGC CGTCTGGCTC
ACTGAAGCGC TCGCGATCGA TGAAGGCATC AACGGTCTTT CGCAGGGTTA CGCGCTCTTG
ACGGGGCTTT GCGAGCGCTA CTGGGATCAC GTGCATCCGC TGCCGGAAGG CGACGACACC
GAATATCGCC TCGGCAACGT CGCGTGGCTG GTCGGGCGTA CGGGCGATCT GCTGCGCGCC
ATGCCGCTCA CGTCGTCGCA AGGTAATGCG TACAGCACCA TCGATTGGGA CGTGGCCACG
CACGTCGCGC AAGCCGTCAA ACGCGATCCG GATCACGCCG ACGATATCGC GCGCGGCAAG
CCGTCGATCG ATCAGATCGA GGCGTCGAAG CGCGCTACGC CGCCGGCATT CTATTCAGCG
CTACTGGTCG ATCTGAAAGC GTTCGAAGCG GCCATGCTCG CGCTCGAACA GGAACTGGAC
CGGCGCGCCG CGGATTCCGC GCCGAGTTTC CGGCAAGCGA AGGACGCTTA CCAAAACGTG
TACCGGTTGG CCGAGCGCTT TGCACGTGAA GTCGGCGTGA ACGCCGAAGT GCCGCCGCCC
GCTAAAGCGC CCGCGGCGAA CGAGCACGAT CGCGCCGAGC CCACCTTCAA GACCGCACCG
CAACGCGAGG AACCTGTGTT GACGACCATG CCGACGAGTC CAATTGCAGG AATCCAGAGC
CGCGCGCAGG CCGTTGCGCA GTTGCGCGCG GTGGCCAAGT TCTTTCGCGC GACGGAGCCG
CATAACCCTG CCGCGTATTT CGCCGACAAG GCTGCGGAGG CCGCGGATAT GCCATTGCAT
CAATGGCTTT CGACGGTGGT GAAAGACGAT GGATCGCTCG CGCATATTCG CGAGTTGCTG
GGCGTGAAGC CGGAAGAGAA CAGCGAATAA
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| Protein sequence | MPINLDILLA PLSETSPCGE DLLFSADFDA IQHARRFEDP SLDQGEWVTE IKEADWAFVV
ERSGSLLQTQ TKDLRLAVWL TEALAIDEGI NGLSQGYALL TGLCERYWDH VHPLPEGDDT
EYRLGNVAWL VGRTGDLLRA MPLTSSQGNA YSTIDWDVAT HVAQAVKRDP DHADDIARGK
PSIDQIEASK RATPPAFYSA LLVDLKAFEA AMLALEQELD RRAADSAPSF RQAKDAYQNV
YRLAERFARE VGVNAEVPPP AKAPAANEHD RAEPTFKTAP QREEPVLTTM PTSPIAGIQS
RAQAVAQLRA VAKFFRATEP HNPAAYFADK AAEAADMPLH QWLSTVVKDD GSLAHIRELL
GVKPEENSE
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