Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4919 |
Symbol | |
ID | 6278359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1044410 |
End bp | 1047085 |
Gene Length | 2676 bp |
Protein Length | 891 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616005 |
Product | type VI secretion ATPase, ClpV1 family |
Protein accession | YP_001888653 |
Protein GI | 187919622 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.989717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00768481 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACGT CCCTCAATAC CCTGATCGCC AAACTGAATC CGACCTGCCG GCAGGCGGCT TTGCTGGCGG CGAACAATTG TCTCGCGCGC GGTCACTACG AGGTCGACCT CGAGCATCTG CTGCTCCCGC TGCTGGACGA ACCGGCCAGC GACGTCGCAC TGGTGCTGCG CGCGAGCAGG ATCGACCCGC ACGCCTTGCG CGCGGATCTC GAGCGCGAGT TGCAGCGTTT GAAAACCGGC AATACGCGTA CGCCGGTGTT TTCGAAGCAT CTGATCGAGT TGCTCGAACA GGCGTGGTTG ATTGCATCGC TTGATTCGCA GATTGGGCGG ATTCGCTCAG GGCATCTGCT ACTGGCGCTT TTGAGCGCAC CGGATCTCGC GCAATTCGCC GAGCGCATGT CGCCGCTGCT GCGCGACGTG CGTGTGACCG ACCTGAAGCA CAAATTCGAT GAGCTGACTG CGGGTTCGCG CGAAGTCGAG CACAGCAATG ACACGCAAAG CGCGGGAGAT AGCGCGAGTG ATCCGGTGGC GAGCGCTGTC GCGCCGGGCG CGCCGTCTAA AACGCCCGCG CTCGATACCT ACACCAGCAA CCTCACGCAG CGTGCGCGGG AAGGCAAGAT CGATCCGGTG ATCGGCCGCG AAGGCGAGAT TCGCCAGGCC ATCGATATTC TGATGCGGCG CCGCCAGAAC AATCCGATCA TGACGGGCGA AGCGGGCGTC GGTAAAACGG CCGTGGTCGA AGGTCTCGCG CTGCGCATTG CCGCCGACGA TGTGCCCGCG CCGCTCAAAG GCGTCGCGCT GCACGTGCTC GACATGGGGT TGCTGCAAGC CGGCGCGAGC GTGAAAGGCG AGTTCGAAAA CCGCCTGAAG AATGTGATCG ATGAGGTCAA GAAGAGTCCG CATCCAATCA TTCTCTTTAT CGACGAAGCG CACACCATCA TCGGCGCCGG TGGTCAGGCC GGGCAGAACG ATGCGGCCAA TCTGCTGAAG CCGGCCTTGG CGCGCGGCGA ATTGCGCACC ATCGCGGCCA CCACGTGGAG CGAGTACAAG AAGTACTTCG AGAAAGACGC GGCGCTCGCG CGGCGTTTCC AGGTCGTGAA GATCGAGGAG CCTAGCGAGG CGCTCGCCGC GGCTATGTTG CGCGGCATGG CTTCGCTGAT GGAAAAGCAT TTCAATGTGC GCGTGCTGGA TGATGCGATC ACAGAAGCCG TGCGTCTGTC GCATCGCTAC ATCAGCGGCC GGCAACTGCC GGATAAAGCG ATCAGCGTGC TCGACACCGC TTGCGCGAAA GTCGCGCTCG CGCACAGTTC GACACCGGCG ACCATCGACG ACACGAAAAA ACGCCTCGAA CGTATCGACG CTGAAATCGC CGCGCTGGAA CGCGAAGCGG CGAGCGGCGC GCTGCACGAT GAACGCCTCG CTGAATTGCG CGGCCTGCGT GAAGAGGACC TCAAAGACCT CGCCGCAGAC GAAGCGCGCT ACGACAAGGA ACGCGTATTG GTGACGGAGA TAGTCGGCTT GCGCGCTGAC ATCGACGCGG CGCGCGTGAA CAGCGCGGGC CCGGAGCAGG CGGATAAGGC ACAGCAGGCG CGCGAAAAGC TTGCCGCGCG CGTCGCCGAA TTGCACGCCT TGCAAGGCGG CCAACCGATG GTGCCGCTGC AGGTCGACGC TCATGTGGTC GCCGAAATCG TCGCCTCGTG GACCGGCATT CCGCTCGGCC GCATGGTCAA GGACGAAATC CAGACCGTGC TGAACCTGCA GCCGTTGCTG GCCGCGCGTG TGATCGGTCA GGACCATGCG CTCGAAGCGA TCGCGCAGCG CGTGCGCACC GCTAGTGCGA ATCTTGAAGA CCCGAACAAG CCGCGCGGCG TGTTCATGTT CGTCGGACCG TCGGGCGTCG GCAAGACCGA AACCGCGCTT GCGCTGGCCG ATGTGCTGTA CGGCGGCGAA CGCAAGATGG TCACGATCAA CATGAGCGAG TATCAGGAAG CGCACAGCGT GTCCGGCCTG AAGGGTTCCC CGCCGGGCTA TGTCGGTTAC GGCGAGGGCG GTGTGCTGAC CGAAGCGGTG CGCCGCAATC CGTATTCGGT GGTGCTGCTC GACGAAGTCG AAAAGGCGCA CCCCGAAGTG CTCGAAATGT TCTTCCAGGT GTTCGACAAA GGCACGATGG ACGACGCCGA AGGCCGCGAG ATCGATTTCC GCAACACGTT GATCATTCTG ACTTCGAATG TCGGCTCGCA GGCGGTGATG CAGGCGTGCC TGAACAAGAG CGCGGAAGAA CTGCCCGACG CCGATGAACT CGCGGAAACC TTGCGTCTGC AGTTATACAA AGCATTCAAA CCGGCATTTC TCGGCCGCAT GAAAGTGGTG CCGTACTATC CGATTTCCGA CGACGTACTG GCCGAGATCA TCGAATTGAA ACTCGACCGG ATTCGCCGCC GCATCGAGTC GAATCACAAG GCAGTGTTCG AGTGGGACGA GTCGCTGGTC GATGCGGTGC TCGCGCGTTG CACCGAGGTG GATTCCGGCG CACGCAATGT GGATCACATT CTGAACGGCA CGCTCCTGCC CGAAGTCGCG CAGCAGGTGC TGGAACGTGT GGCGAACGGC GCCGCGATCG AGCGCATTGC CGTGCGCGCG AGCGAGGCGG GTGAGTTCGA CTACACGGTG GTGTGA
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Protein sequence | MSTSLNTLIA KLNPTCRQAA LLAANNCLAR GHYEVDLEHL LLPLLDEPAS DVALVLRASR IDPHALRADL ERELQRLKTG NTRTPVFSKH LIELLEQAWL IASLDSQIGR IRSGHLLLAL LSAPDLAQFA ERMSPLLRDV RVTDLKHKFD ELTAGSREVE HSNDTQSAGD SASDPVASAV APGAPSKTPA LDTYTSNLTQ RAREGKIDPV IGREGEIRQA IDILMRRRQN NPIMTGEAGV GKTAVVEGLA LRIAADDVPA PLKGVALHVL DMGLLQAGAS VKGEFENRLK NVIDEVKKSP HPIILFIDEA HTIIGAGGQA GQNDAANLLK PALARGELRT IAATTWSEYK KYFEKDAALA RRFQVVKIEE PSEALAAAML RGMASLMEKH FNVRVLDDAI TEAVRLSHRY ISGRQLPDKA ISVLDTACAK VALAHSSTPA TIDDTKKRLE RIDAEIAALE REAASGALHD ERLAELRGLR EEDLKDLAAD EARYDKERVL VTEIVGLRAD IDAARVNSAG PEQADKAQQA REKLAARVAE LHALQGGQPM VPLQVDAHVV AEIVASWTGI PLGRMVKDEI QTVLNLQPLL AARVIGQDHA LEAIAQRVRT ASANLEDPNK PRGVFMFVGP SGVGKTETAL ALADVLYGGE RKMVTINMSE YQEAHSVSGL KGSPPGYVGY GEGGVLTEAV RRNPYSVVLL DEVEKAHPEV LEMFFQVFDK GTMDDAEGRE IDFRNTLIIL TSNVGSQAVM QACLNKSAEE LPDADELAET LRLQLYKAFK PAFLGRMKVV PYYPISDDVL AEIIELKLDR IRRRIESNHK AVFEWDESLV DAVLARCTEV DSGARNVDHI LNGTLLPEVA QQVLERVANG AAIERIAVRA SEAGEFDYTV V
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