| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4916 |
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| Symbol | |
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| ID | 6278361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1040879 |
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| End bp | 1041358 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642616002 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_001888650 |
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| Protein GI | 187919619 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00677472 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00161069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACGCT TCGAACCCAG CTTTCTCGAC AAGCTGTTCG ACGACGAACC GCATCTGCCG
GCATCTCCGG CAATGCGGCA ATTGTCATTG GATGAATTGA AGAGCACAGT CGCGCGCGAC
GTCGAGGCGA TCCTGAATAC GCGCATCGCG CTGACCGAGC ACGAGCTGGC GGCGTTGCCG
GAATGTCAGC GCTCGGTCCT CACGTACGGC CTGAACGATT TCGCGGGTTT GAGTCTTGCG
AGCCATTACG ACCGCACGTT CATCTGCAAA TCGATTCAAC AGGCCATTGC GCGGCACGAG
CCGCGTTTGC AGCAGGTGGC GGTCACGCTC GAATTGAACG AACAATCCAC CAATGCGCTG
AACTTCGCGA TTCAGGCGCT GCTGGTGGTG CATCCGGCGG AAGAACCGGT GAGTTTCGAT
GCGATGTTGC AGCCGTCCAC GTTGCAGTAT TCAGTGACGC GCGCACGCGC GAAGTTGTAG
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| Protein sequence | MKRFEPSFLD KLFDDEPHLP ASPAMRQLSL DELKSTVARD VEAILNTRIA LTEHELAALP
ECQRSVLTYG LNDFAGLSLA SHYDRTFICK SIQQAIARHE PRLQQVAVTL ELNEQSTNAL
NFAIQALLVV HPAEEPVSFD AMLQPSTLQY SVTRARAKL
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