| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4914 |
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| Symbol | |
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| ID | 6279184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1038722 |
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| End bp | 1040212 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616000 |
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| Product | type VI secretion protein, EvpB/VC_A0108 family |
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| Protein accession | YP_001888648 |
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| Protein GI | 187919617 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000326238 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0140639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGC AAACGGCAGC AGCTCAACTC GCGACCGCGC AAAGCGGTAC GGAATCCACG
CTGCTCGACG AAATCGTCGA GAAAAGCCGC GTGGCTAAGT CCGATTCCGA GCACGCGCGC
GCGAAAGACC TGATCGGCGA ACTCGTGCAT CAGGTGCTCG ACGGCACGGT GGTGGTGTCC
GACAACCTGT CGGCCACCAT CGACGCACGC GTCGCCGAAC TCGACCGCCT GATCTCCGCG
CAGTTGAGCG CGGTGATGCA CGCGCCCGAA TTCCAGCGCA TGGAAAGCAC GTGGCGCGGT
CTGGACTATC TGTGCAAGGA AAGCAATACC GGCGCAACCG TCAAGATCAA GGCGCTGCAT
GCGCCCAAGC GCGACCTGGT GCGCGACTTC AAGACCGCGA TCGAATTCGA TCAGAGCGCA
TTGTTCAAGA AGATCTACGA AGAAGAATTC GGCACCTTCG GCGGCTCGCC GTTCGGCACG
ATCGTCGGCG ACTTCGAAGT GACGCGCCAG CCGGAAGACA TGTACTTCAT CGAGCAAATG
TCGCACGTTG CCGCGGCCGC GCATGCGCCG TTCATCGCGT CGGCTTCGCC CGAATTGATG
GGCCTCGATA CCTTTGCCGA CCTCGGCAAG CCGCGTGATC TCGGCAAGGT GTTCGACACG
GTCGAATACG CCAAGTGGAA GTCGTTTCGC GACGCCGAAG ATTCGCGCTA TGTCGGTCTC
ACGCTGCCGC GCTTTCTCGG CCGCCTGCCG TTCAATCCGA AAGACGGCGC CACGGCGGAG
GGTTTCAACT TCGTCGAAGA CGTGGACGGC ACGGATCACA GCAAATACCT GTGGTGTAAC
GCGGCGTGGG CGTTCGCCGC ACGCCTGACG GCCGCATTCG ACGACTTCGG CTGGTGCGCG
GCGATTCGCG GCGTGGAAGG CGGCGGTCTG GTGGAAGATC TGCCCACCCA CACTTTCAAG
ACCGACGACG GCGAAGTCGC GCTGAAATGC CCGACTGAAA TCGCGATCAC CGACCGCCGC
GAAAAGGAAC TGAGCGACCT CGGTTTCATT CCGCTCGTGC ATTGCAAGAA CTCCGACTAC
GCCGCGTTCT TCGCCGCGCA ATCGGTGCAG AAACCCAAGA AATACAGCAC CGACAGCGCG
AATGCCAATG CGGTCCTGTC CGCGCAATTG CAGTACATCT TCTCGGTATC GCGCGTCGCG
CACTACCTGA AGGCGATGAT GCGCGACAAG ATCGGCAGCT TTGCATCGGC ACAGAACGTC
GAAGTATTCC TGAACCGTTG GATCTCGCAG TACGTGCTGC TGGACGACAA CGCCACTCAG
GAGCAGAAGG CGCAGTTCCC GCTGCGCGAG GCATCGATTC AGGTCTCGGA GATTCCGGGC
AAGCCTGGTG CGTATCGTTC GGTCGCATTC CTGCGTCCGC ACTTTCAACT GGACGAGCTG
TCGATCTCTT TGCGGCTTGT CGCTGACCTG CCGAAACCGG CTAATTCATA A
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| Protein sequence | MNQQTAAAQL ATAQSGTEST LLDEIVEKSR VAKSDSEHAR AKDLIGELVH QVLDGTVVVS
DNLSATIDAR VAELDRLISA QLSAVMHAPE FQRMESTWRG LDYLCKESNT GATVKIKALH
APKRDLVRDF KTAIEFDQSA LFKKIYEEEF GTFGGSPFGT IVGDFEVTRQ PEDMYFIEQM
SHVAAAAHAP FIASASPELM GLDTFADLGK PRDLGKVFDT VEYAKWKSFR DAEDSRYVGL
TLPRFLGRLP FNPKDGATAE GFNFVEDVDG TDHSKYLWCN AAWAFAARLT AAFDDFGWCA
AIRGVEGGGL VEDLPTHTFK TDDGEVALKC PTEIAITDRR EKELSDLGFI PLVHCKNSDY
AAFFAAQSVQ KPKKYSTDSA NANAVLSAQL QYIFSVSRVA HYLKAMMRDK IGSFASAQNV
EVFLNRWISQ YVLLDDNATQ EQKAQFPLRE ASIQVSEIPG KPGAYRSVAF LRPHFQLDEL
SISLRLVADL PKPANS
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