| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4911 |
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| Symbol | |
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| ID | 6279140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1036452 |
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| End bp | 1037084 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642615997 |
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| Product | type VI secretion lipoprotein, VC_A0113 family |
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| Protein accession | YP_001888645 |
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| Protein GI | 187919614 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000403231 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.009082 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATATGA ATTCGCATGT TATTCGCTAT GCATCGTTAT TGATTGCCAA TGCGGCCGCC
TGCCTGCTGC TGGGCGGCTG CGCAGCGGGC GTGACGGTGC TCGGAGCCGC TGCCAACGCG
GCTTTGCAGG CAAGCGGCCT CGGCAAACCG GACCTGCCGG ATGCCCAGAA ACCGCCGCGC
AATGTCGGTC TCACCTTATA TGCCGCACCG AATCTGAATG CCGCGAATGA CAAACGGCCA
TTGGCGCTGG TAGTACGGCT TTACGTGCTG AAAGACCCGA CTTCATTCCA GCAGGCGCCA
TTCGACGCAT TTACCGATCC GGCAAAGGAA AAGACCATAC TGGGCGGTGA TTTGCTGGGC
GTGCGCGAAG TAACGCTGAT CCCCGGCCAG CGCTACGTTG TTACCGAAAA AGTCTCGCGT
GAAGCGCAGG CATTCGGTAT CGTCGCGCTA TTCCGCGATC CGGCAATGCA GCGCTGGAAA
TTTGCCTTCG ACCCGGCGAA GTCGGAGAAA TCCGGCATAA TGATCGGCCT GCATAACTGT
GCAATGACGG TGACCAATGG CACGGTGATC CCGCCAGACC AGGGACTGCC CGCGCAAGCG
CTGAATATGC TTTCTTCGGT AAGCTGCGGA TAA
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| Protein sequence | MYMNSHVIRY ASLLIANAAA CLLLGGCAAG VTVLGAAANA ALQASGLGKP DLPDAQKPPR
NVGLTLYAAP NLNAANDKRP LALVVRLYVL KDPTSFQQAP FDAFTDPAKE KTILGGDLLG
VREVTLIPGQ RYVVTEKVSR EAQAFGIVAL FRDPAMQRWK FAFDPAKSEK SGIMIGLHNC
AMTVTNGTVI PPDQGLPAQA LNMLSSVSCG
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