| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4910 |
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| Symbol | |
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| ID | 6279047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1034997 |
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| End bp | 1036343 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615996 |
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| Product | type VI secretion protein, VC_A0114 family |
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| Protein accession | YP_001888644 |
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| Protein GI | 187919613 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000188253 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00743846 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTATT CCGCAAAAGT GCTCTGGGGG GAAGGCCTGT TTTTGAGGCC GCAGCATTTT
CAGCGTCAGG ACGCTTATCA TGAGGCGCGC CTGTTCGAAT CGATCCAGGC GATCCAGCCG
TATAACTGGG GCGTGCGCTC GGCGCGCTTC GACCGCGACG CGCTCGGCAG CAACGTGCTG
CGCGTGAGCG AACTCTCACT GGTATTTCCC GACGGCGCGC TCTACTCCGC GCCGCAGGCC
GACGATCTGC CGCCGCCCAT CGCGCTGGAT ACGCTGCCCG ACGGCATCAA CGAATTCACG
TTTTATCTTG CGCTGCATCC GCTGCGCGAA ACCGGCGCGA ACTATGCACA GGACAGCAAC
GCCGGTTTCG TGTCGCGTTA CGTAAGCGAG CAGACTCCGG TGGCCGATCA TTTCACCGAC
GCCGCCGAAG CCGACATCAC CTTCCTGAAG ACCAGCGTCA AGTTGATCGC GCATAGCGAG
CCGCGCGATC AACTGCTCTC GGTGCCGCTC GTGCGTGTAC GCCGCACCGC TACGAGCGGT
TTCGAAATCG ACGATACGTT CGTGCCGCCC TGCCTCGCAA TCGACGCCTC GCCGATCCTG
CATCAGCGCC TGCGCCAGCT GATCGACGCA CTGCAGGCCA AGGTCAACGC GTTATACGGT
TTTCACCGCG AGCCGACCAA GAACATCATC GAATTCCGTT CCGGCGACAT CGCGTCGTTC
TGGCTTCTGC ATACCGCGAG TGCGGCATTC GCGTCGCTCG CGCATCTGTA CCAGCATTCG
GCGCTGCATC CCGAACGCCT GTTCCAGGAA CTGCTGCGCC TCGCCGGCCA GTTGATGACG
TTTTCGAAGG GCTACGCGCT GTCCGACTTG CCGGCTTACC GGCACGACGA TCCGGGGCCC
GGCTTCGCGC GCCTCGACAC GATCCTGCGC GATCTGCTCG AAACCGTGAT CTCCACGCGC
TACTTCGCGA TCGCGCTCGA GGAAGTGCGG CCGTCGTTCC ATGCGGGCCG GCTCGACTCA
GGCAAGATCG ACGACAAAAC CATGTTCTAC ATCGCGGTGT CGGCTGATAT GCCGACCGCC
GAGCTCGTGG AAGCCGTGCC CGCGCGCTTC AAGGTCGGCG CGCCGGACGA CGTCGACAAG
CTGGTGCTCT CGGCCATGCC GGGCGTGCGG CTCGTCTACA CGCCGCAGGT GCCGCCCGCC
ATTCCGGTCC GTCCGGGCGC GTGCTACTTC TCTTGCGAAT CGCGTGGCGC GCTGTATGAC
CGTATGTTGC AGGCCCAATC GGCAATGATC TATGCGCCGT CGGGCATCAA CGATCTTCAA
CTCGAACTGA TCGCCGTCAC ATCATGA
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| Protein sequence | MSYSAKVLWG EGLFLRPQHF QRQDAYHEAR LFESIQAIQP YNWGVRSARF DRDALGSNVL
RVSELSLVFP DGALYSAPQA DDLPPPIALD TLPDGINEFT FYLALHPLRE TGANYAQDSN
AGFVSRYVSE QTPVADHFTD AAEADITFLK TSVKLIAHSE PRDQLLSVPL VRVRRTATSG
FEIDDTFVPP CLAIDASPIL HQRLRQLIDA LQAKVNALYG FHREPTKNII EFRSGDIASF
WLLHTASAAF ASLAHLYQHS ALHPERLFQE LLRLAGQLMT FSKGYALSDL PAYRHDDPGP
GFARLDTILR DLLETVISTR YFAIALEEVR PSFHAGRLDS GKIDDKTMFY IAVSADMPTA
ELVEAVPARF KVGAPDDVDK LVLSAMPGVR LVYTPQVPPA IPVRPGACYF SCESRGALYD
RMLQAQSAMI YAPSGINDLQ LELIAVTS
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