| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4909 |
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| Symbol | |
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| ID | 6279045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1034218 |
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| End bp | 1035000 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615995 |
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| Product | type IV / VI secretion system protein, DotU family |
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| Protein accession | YP_001888643 |
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| Protein GI | 187919612 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0340153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0265168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACG CGCCATCCCT CTTTGGCGGC AGCAGCACGC CTACCGCCAC GCCCGCACCG
ATCACCGAGC CGACCTATCA GGTTCGTTCG CTGCTCGATT TGCTGTACGA CGGTTTCTTC
ATGCTGTTCC TGTTGAAGAA CGGCCGTGAA CCCGGCGACG CGCAGGAGTT CAGCCAGCGC
ATCCAGCAGT TCCTCGGCGA CTTCGAACGC GGCGCGAAGA AGCTCAATGC GTCGGCGGAC
GATGTCTATG CGTCGAAGTT TGCGTTCTGC GCGGCCATCG ACGAATCGGT GCTGTCGTCC
ACCTTCAGGA TCCGCACGGA ATGGGAGCGC CGGCCGCTGC AACTGGTGCT GTTCGGCGAG
CAACTGGCGG GCGAGAAGTT TTTCCAGTAT CTCGAGGAAT GCCGCGCACA AGGCGCGGCG
CGTTTGCAAT CGCTCGAGGT GTTTCACATG TGCCTGCTGC TCGGCTTCCA GGGCAAGTAT
CTGCTGGAAG GACCGGAGAA GCTCGCGTAT CTGACCGCGC GCATCGGCGA TGAAATCGCG
CATATGAAAG GCAAGCGCGC GCCGTTTGCG CCGCATTGGC CGTTGCCCGA TCAGGTCGCG
CACCGTCTGA AACGCGAGGT GCCGCTGTGG TCGATCGGCG CGGTGTTCGC GCTGGTGGGA
TTGCTGGCTT ATCTCGGCCT GAATACTTAT CTGCGCGATC AGACCTTGCG CTCGCTCGCG
CCGTATTCGC AGGTGGTCAA GCTCGGGCCG CAATCGGCTA CGTTGACGAT TTCGTTGCCC
TAA
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| Protein sequence | MSYAPSLFGG SSTPTATPAP ITEPTYQVRS LLDLLYDGFF MLFLLKNGRE PGDAQEFSQR
IQQFLGDFER GAKKLNASAD DVYASKFAFC AAIDESVLSS TFRIRTEWER RPLQLVLFGE
QLAGEKFFQY LEECRAQGAA RLQSLEVFHM CLLLGFQGKY LLEGPEKLAY LTARIGDEIA
HMKGKRAPFA PHWPLPDQVA HRLKREVPLW SIGAVFALVG LLAYLGLNTY LRDQTLRSLA
PYSQVVKLGP QSATLTISLP
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