Gene Bphyt_4907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4907 
Symbol 
ID6278896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1031424 
End bp1032359 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content67% 
IMG OID642615993 
Productornithine cyclodeaminase/mu-crystallin 
Protein accessionYP_001888641 
Protein GI187919610 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.859869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.025837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACC CGACCACGCA GACTTTCGAC GCCGCCGCGA CCACGCGGCT GATTCCCTAC 
GCCGCGCTCG TCGATGCACT GAAGCGCGCG ACGATCGACT ACGCGCAGCG GCGCATCGCG
AGTCCCGAGC GGCTCGTCGT GCCGCTCAAC GAAGACGGCA TCATGCTGTC GATGCCGGCC
ACTGCGCCCG ATCTCGCGAT CCACAAACTG GTCAACGTAT GCCCGGCCAA TCGCGCACGC
GGCCTGCCGA CCATCCACGG CAAGGTGATG GCGTTCGATG CCGATACCGG CGAGACGCTC
TTCATCCTTG ACGGCCCGAC CGTGACGGGA CGCCGCACGG CGGCGATCTC GATGCTGGGC
GTCGACACCT TTGCCGCCGC AACGCCGCGC GAATTCCTGC TGATCGGCAC CGGCACGCAG
GCACTGAACC ATCTGGAGGC GATCGGCGAA CTGTTTCCCA GCGCGCGCGT ATGGGTGAAA
GGCAGCGCGC CTGCGCGCGC CGAGGCGTTT TGCGCCGCGC ATCAGGGCAA GGCGCATGAT
CTGCGGCCGC TGACGCAAGC CGGCGCCACG ATCCCCGACT CGGTCGATGT CGTGATCGCG
CTGACCACGA GCAGGCAGCC GGTCTACGAC GAAGCGGCAC GCGCGGAGCG CCTCGTGATC
GGCGTTGGCG CATTCACGCC CGCCATGGTC GAGATAGGCG CGCGCACTCT CGGCGAAAGC
GCGCTTTTCG TCGACGACGA AGCCGGCGCG CGCCATGAAG CGGGCGACTT CATTCAGGCG
GGCGTCGACT GGGCTCAGGT CGGCGGCATC GCTTCAGTGC TCGACAATCC AGCGCTATTG
CCGCAAAAAA AACCGATCGT ATTTAAAACC GTCGGCTGCG CTGCATGGGA TCTGGCGGCG
TGCCGCGTGG CGCGCGAGTC CTTGTCAGGA GGTTGA
 
Protein sequence
MTHPTTQTFD AAATTRLIPY AALVDALKRA TIDYAQRRIA SPERLVVPLN EDGIMLSMPA 
TAPDLAIHKL VNVCPANRAR GLPTIHGKVM AFDADTGETL FILDGPTVTG RRTAAISMLG
VDTFAAATPR EFLLIGTGTQ ALNHLEAIGE LFPSARVWVK GSAPARAEAF CAAHQGKAHD
LRPLTQAGAT IPDSVDVVIA LTTSRQPVYD EAARAERLVI GVGAFTPAMV EIGARTLGES
ALFVDDEAGA RHEAGDFIQA GVDWAQVGGI ASVLDNPALL PQKKPIVFKT VGCAAWDLAA
CRVARESLSG G