Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4907 |
Symbol | |
ID | 6278896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1031424 |
End bp | 1032359 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642615993 |
Product | ornithine cyclodeaminase/mu-crystallin |
Protein accession | YP_001888641 |
Protein GI | 187919610 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.859869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.025837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACC CGACCACGCA GACTTTCGAC GCCGCCGCGA CCACGCGGCT GATTCCCTAC GCCGCGCTCG TCGATGCACT GAAGCGCGCG ACGATCGACT ACGCGCAGCG GCGCATCGCG AGTCCCGAGC GGCTCGTCGT GCCGCTCAAC GAAGACGGCA TCATGCTGTC GATGCCGGCC ACTGCGCCCG ATCTCGCGAT CCACAAACTG GTCAACGTAT GCCCGGCCAA TCGCGCACGC GGCCTGCCGA CCATCCACGG CAAGGTGATG GCGTTCGATG CCGATACCGG CGAGACGCTC TTCATCCTTG ACGGCCCGAC CGTGACGGGA CGCCGCACGG CGGCGATCTC GATGCTGGGC GTCGACACCT TTGCCGCCGC AACGCCGCGC GAATTCCTGC TGATCGGCAC CGGCACGCAG GCACTGAACC ATCTGGAGGC GATCGGCGAA CTGTTTCCCA GCGCGCGCGT ATGGGTGAAA GGCAGCGCGC CTGCGCGCGC CGAGGCGTTT TGCGCCGCGC ATCAGGGCAA GGCGCATGAT CTGCGGCCGC TGACGCAAGC CGGCGCCACG ATCCCCGACT CGGTCGATGT CGTGATCGCG CTGACCACGA GCAGGCAGCC GGTCTACGAC GAAGCGGCAC GCGCGGAGCG CCTCGTGATC GGCGTTGGCG CATTCACGCC CGCCATGGTC GAGATAGGCG CGCGCACTCT CGGCGAAAGC GCGCTTTTCG TCGACGACGA AGCCGGCGCG CGCCATGAAG CGGGCGACTT CATTCAGGCG GGCGTCGACT GGGCTCAGGT CGGCGGCATC GCTTCAGTGC TCGACAATCC AGCGCTATTG CCGCAAAAAA AACCGATCGT ATTTAAAACC GTCGGCTGCG CTGCATGGGA TCTGGCGGCG TGCCGCGTGG CGCGCGAGTC CTTGTCAGGA GGTTGA
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Protein sequence | MTHPTTQTFD AAATTRLIPY AALVDALKRA TIDYAQRRIA SPERLVVPLN EDGIMLSMPA TAPDLAIHKL VNVCPANRAR GLPTIHGKVM AFDADTGETL FILDGPTVTG RRTAAISMLG VDTFAAATPR EFLLIGTGTQ ALNHLEAIGE LFPSARVWVK GSAPARAEAF CAAHQGKAHD LRPLTQAGAT IPDSVDVVIA LTTSRQPVYD EAARAERLVI GVGAFTPAMV EIGARTLGES ALFVDDEAGA RHEAGDFIQA GVDWAQVGGI ASVLDNPALL PQKKPIVFKT VGCAAWDLAA CRVARESLSG G
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