| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4885 |
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| Symbol | |
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| ID | 6277952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1008152 |
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| End bp | 1009048 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615971 |
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| Product | putative transcriptional regulator, RpiR family |
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| Protein accession | YP_001888619 |
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| Protein GI | 187919588 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.586943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.761042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCG CTTTTGCTCA AACCGTCGAA GCCCGCTTTG CCGAACTAAC GCCCACTTCC
AAGCGCGTCG CCAGCTACAT GCTGGCCAAT CTCGACCGGC TCGGCCTCGA AACCGCCGAC
CAGATCGCCC AGCAAGCCGG CACGAGCGGC ATCTCGGTCG GCCGCTTCCT GCGCAGCATC
GGCTATCGGA ATCTCGACGA CCTGAAGCGC GAACTGCGCG GCGCTCAGGA ACGTCCATGG
CTGATCACGG ACCGGCTCGA TGCATTCCGC CGCGCCGCCG GTCAACACGA CGGGACAACG
CCGGACGCCG GTTCGCCTGC CGAGCCCAAC CCCGCGCTCG CCCATTCACT CGAACTCGAG
ATCGGCGCGA TCCAGCATGT CTACCAGCTC GCTCAATCGC CGGTATTCGC GCGCGTGGCC
GAGCGCATCT CGAACGCGGA TGCCGTCTAC ATTCTCGGCA TTCAGTCCAC GCGCGGCATC
AGCAACGCGT TCTACAGCTA CCTCGAATAC ATTCGTCCGC GCGTGTTCTA TTCCGACGGC
ATGTCGGGCT CGTACGTCGA TTCGCTGAAC TCCGGCTTCG AATCGCCTTA TCTGATCGTG
ACCGACACGC GCGCTTACTC GAAGGTCGCG CGCCGCTATT GCGAAGCCGC CACGCGCCGC
GGCCTGCCGT TCGCGCTCAT CACCGACATT TACTGTCCGT GGGCGCGCGA GTTCGACGGC
GATCTGCTGC AGGTGAAAAC CGACGTCGGC CAATTCTGGG ATTCGCTCGC ACCGCTCACC
TGCCTTTTCA ATCTGCTCAT CTCGGCGATC GTCGAAAGAC TCGGACCGCG TATCGACGAA
CGCGTCGCGC GCAACCGGGA ACTGCAAAGC GAGTTCGATC AATTCGACGA CCTCTGA
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| Protein sequence | MPTAFAQTVE ARFAELTPTS KRVASYMLAN LDRLGLETAD QIAQQAGTSG ISVGRFLRSI
GYRNLDDLKR ELRGAQERPW LITDRLDAFR RAAGQHDGTT PDAGSPAEPN PALAHSLELE
IGAIQHVYQL AQSPVFARVA ERISNADAVY ILGIQSTRGI SNAFYSYLEY IRPRVFYSDG
MSGSYVDSLN SGFESPYLIV TDTRAYSKVA RRYCEAATRR GLPFALITDI YCPWAREFDG
DLLQVKTDVG QFWDSLAPLT CLFNLLISAI VERLGPRIDE RVARNRELQS EFDQFDDL
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