Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4880 |
Symbol | |
ID | 6277420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1004428 |
End bp | 1005420 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642615967 |
Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
Protein accession | YP_001888615 |
Protein GI | 187919584 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.184039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.779449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCGTC ACGCCCGTTA TTCGCTTCAA CTCGCCGCCT TGCTCGCAGC ATTCACCACC TTGAGCGCCA CCGCGCAGAC CGGCGGCAAC GCCGGCGAGC CGGCCAAGGT ACTGCGCATC GGCTATCAGA AATCAGGCCT GCTTGCGATA CTCAAGGCGC AAGGCTCGCT CGACGAAAAA CTCAAACCGC TCGGCTACAG CATCAAGTGG TTCGAATTCC CTGCTGGACC GCAACTGCTC GAAGCGTTGA ACGCGAACAG CATCGACTTC GGCTACACGG GCGCGCCGCC GCCGGTGTTC GCTCAAGCTA GCGGCGTACG CTTCGTGTAC GTCGGCGCCG AGCCTTCAGG AAGCCACGCC GAAGCGATCC TCGTCAAAGG CGACTCGCCG TTGCGTAGCG TGGCCGATCT GAAAGGCAAA CGCGTCGCGC TGCAAAAAGG CTCGAGTTCG AACTATCTGA TACTCGAAGC GCTCAAGAAA GCGGGCCTGC GCTACGAGGA CATTCGCCCG GTGTATCTGC CGCCCGCCGA CGCGCGCGCC GCCTTCGAAA GCGGCAGCGT CGATGCATGG GTGATCTGGG ATCCGTACTA CGCGTCCGCG CAGCAGGCAC TGAAGGCGCG CACGCTGGCC GACTACACCG AACTCAATGC CCCATACAAC TTCTACGAAG CGACGCGCGA CTTCGCGCAG CAGCATCCCG ACGTGATTGG CGCGATTCTC GGACAGTTGC GCACCGCGGG GTTGTGGGTC AACGCGCATC CGGTGGAAAC CGCCGCGCTC ATCGCGCCGA AGGTCGGTCT CGATCAGAAG CTGGTCGAAA CGTGGGTGCG CCGCTATCCG TATGGCACCA CCGCCGTCAC GGACGAGATC GTGCGCTCGC AACAAATAGT CGCCGATGCG TTCTACGGCG CCAATCTCAT CCCAGCAAAG ATCACCGTCA AAGACAGCGT CTGGCAAAAC CGAGAAGTCA CGGCGGCTCT CGCCGCGAAG TAG
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Protein sequence | MVRHARYSLQ LAALLAAFTT LSATAQTGGN AGEPAKVLRI GYQKSGLLAI LKAQGSLDEK LKPLGYSIKW FEFPAGPQLL EALNANSIDF GYTGAPPPVF AQASGVRFVY VGAEPSGSHA EAILVKGDSP LRSVADLKGK RVALQKGSSS NYLILEALKK AGLRYEDIRP VYLPPADARA AFESGSVDAW VIWDPYYASA QQALKARTLA DYTELNAPYN FYEATRDFAQ QHPDVIGAIL GQLRTAGLWV NAHPVETAAL IAPKVGLDQK LVETWVRRYP YGTTAVTDEI VRSQQIVADA FYGANLIPAK ITVKDSVWQN REVTAALAAK
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