Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4879 |
Symbol | |
ID | 6278368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1002703 |
End bp | 1004304 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615966 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001888614 |
Protein GI | 187919583 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0491968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.91768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAC GCATGCTGCC CCACGACGCC GCGGCGCCCG ACGCGTTAGC GCCTGTCGAG ACCGATATCG CCATCATCGG GTCCGGGTTC GCGGGCCTCG GCATGGCGAT CCGCCTGCGC CAGTCCGGCA TCACGGACTT CATCGTCGCC GAGAAGGCCG ACTCCGTCGG CGGCACGTGG CGCGACAACC ATTACCCCGG TTGCGCTTGC GACGTCCAAT CCCACGTCTA CTCGTTCTCC TTCGCTCCGA ATCCGCGCTG GACCCGAATG TTCGCGCGCC AGCCGGAAAT CCGCGCTTAC CTCGAAGACT GCACGCAGCG CTTCGGCGTC GAGCGGCATC TGCGTTTCGG CCATGAACTG GCGAGCGCAA TCTACGACGA AGCGCGCCAC CGCTGGCAAC TGACCTTCGC GAACGGCCGG CAATGGTCGG CACGCGTGCT GATCTCCGGT ATGGGCGGCC TGTCGCGCGC GGCCGTGCCG AACATTCCCG GCCTCGATAA ATTCAAGGGC AAGACGTTCC ACTCGCAGCA GTGGGATCAC AGCTATTCGC TCGAAGGCAA ACGCGTCGCC GTGATCGGCA CGGGGGCGAG CGCGATCCAG TTCGTTCCGC AGATCGCGCC GCGCGTCGCG CATCTCGACC TGTTCCAGCG CACGCCGCCG TGGATCATGC CGAAGGCCGA CCGCGCCGTC AGACCGCTGG AGCAATGGCT GTTCAAACAC CTGCCGTTCA CGCAGAAGAT CATGCGCTCG GCGCTCTACT GCATGCTCGA ATCGCGCGCC TTGGGATTTG CGATTCATCC TTCGCTGATG AAGACCGCGC AGAAAGCCGC GGAGCGGCAT CTGCGCCGCC AGGTGCGCGA TCCGCAGTTG CGCGCCGCGC TCACGCCTAA TTACACAATG GGCTGCAAGC GCGTGCTGAT CTCGAACGAC TACTTCCCCG CCATATCGCG CCAGAACGTT TCGGTGACGA CCACCGGCAT CGCGCGCATC GAGGAAGACG CCGTGGTCAC CACCGACGGC GCGCGTCATC GCGCCGACTG TCTGATCTTC GGCACCGGCT TCCAGGTGGC CGATCCGTTT CCGCGCGGCG TGGTACGCGG ACGCGGCGGT GTGGATATCG TCGATACATG GCGCGACGGC GCGCATGCTT ACCTCGGTAC GGCATTGCCT GGTTATCCGA ACTTCTTCAT GGTGGTCGGA CCGAACACCG GTCTGGGTCA TAACTCGATG GTGTTCATGA TCGAGTCGCA GGTCGAGTAC ATCCTGCGCG CGCTGAAGAC GATGCACGCC GAACGCGCCG ACGCCATCGA AGTGCGCCCG CAGGTGGAGC GCGCGTACAA CGAGCGGATC CAGCAGAAGC TCGGCCGCGC GATCTGGTCC ACGGGTGGCT GCAAGAGCTG GTATCTCGAT CCGGCCACCG GCAAGAACAC GACGCTATGG CCGGGATTTG CCTACAAATT CCGCCAGGCC ACCAGCACCT TCAGCATGGA CGATTACCTC GCGTATTCGC CCGCGCCGCG TGCGGCGAGC GTGCCGACGG GTTCAGCGCA AGACACGCAC GCTCATGGGG GCGCTGCTTC AGCGCCCGTG GAAGCAGCCT GA
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Protein sequence | MNARMLPHDA AAPDALAPVE TDIAIIGSGF AGLGMAIRLR QSGITDFIVA EKADSVGGTW RDNHYPGCAC DVQSHVYSFS FAPNPRWTRM FARQPEIRAY LEDCTQRFGV ERHLRFGHEL ASAIYDEARH RWQLTFANGR QWSARVLISG MGGLSRAAVP NIPGLDKFKG KTFHSQQWDH SYSLEGKRVA VIGTGASAIQ FVPQIAPRVA HLDLFQRTPP WIMPKADRAV RPLEQWLFKH LPFTQKIMRS ALYCMLESRA LGFAIHPSLM KTAQKAAERH LRRQVRDPQL RAALTPNYTM GCKRVLISND YFPAISRQNV SVTTTGIARI EEDAVVTTDG ARHRADCLIF GTGFQVADPF PRGVVRGRGG VDIVDTWRDG AHAYLGTALP GYPNFFMVVG PNTGLGHNSM VFMIESQVEY ILRALKTMHA ERADAIEVRP QVERAYNERI QQKLGRAIWS TGGCKSWYLD PATGKNTTLW PGFAYKFRQA TSTFSMDDYL AYSPAPRAAS VPTGSAQDTH AHGGAASAPV EAA
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