| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4868 |
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| Symbol | |
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| ID | 6278975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 992325 |
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| End bp | 993317 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642615955 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001888603 |
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| Protein GI | 187919572 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.13349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.332179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGA AGTTTGCCCC TTCCCGTGTT TCGCTGATCG TCGCGGCTTC GGTGCTGGCC
TTGAGCACCG TGTCGGCACA AGCGCGTGTG TTCCGCGTGT CCGACGTGCA CGGCGACACC
TATCCGACCA ACATGGCCGT GAAACACATG GGAGAAGAGA TCAACAAGGC AACCGGCGGC
AAAGACTCCG TGAAGGTCTT CGGCAATAGC GCGCTGGGTT CCGAAAACGA CACGATCGAT
CAGGTGCGCA TCGGCGCGCT CGACATGGCG CGCGCCAACG GCGCCGCGTT CAACGAGATC
GTGCCGGAAT CGATGATCCC GTCGCTGCCG TTCCTGTTCC GCGACATCGA CCATTTCCGC
AAAGTGATGT ACGGCCCGGA AGGCCAGAAG ATTCTCGACG CTTTCAAGGC GAAGGGCATG
ATCGCGCTGA CGTTCTACGA GAGCGGCGCG CGTTCCATCT ACACCAAGAA GCCGATTCAC
ACGCCGGCTG ATATGAAGGG CCTCAAGGTT CGCGTGCAGC CGTCCGATCT GATGGTCGAC
GAAATCCGCG CAATGGGCGG CACGCCCACG CCGATGCCGT TCGCCGAAGT CTATACGGGC
CTGAAGACGG GTCTGGTGGA TGCCGCTGAA AACAACCTGC CGTCGTACGA AGAAACCAAG
CACTTCGAAG TCGCGCCGGT CTACTCCGAA ACCCAGCACT CGATGACGCC GGAAGTGCTC
GTGTTCTCGA AGAAAGTGTG GGACACGCTG ACGCCGCAAG AGCAGGAGAT CATCAAGAAA
GCTGCGGCGG ACTCGGTGCC TTACTACCAG AAGCTGTGGA CCGCACGCGA AGCCGATGCG
AGCAAGACGG TCACGAAGGG CGGCGCGACC ATCGTCGCCT CGACGCAGAT CGATCGTGCC
GCGTTCGTCA AGGCGATGCA GCCGGTCTGG GCGAAGTACG AAAAGACCCC GCAAATGAAG
CAGCTCGTCG ACGAGATTCA GGCAGTCAAA TAA
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| Protein sequence | MNKKFAPSRV SLIVAASVLA LSTVSAQARV FRVSDVHGDT YPTNMAVKHM GEEINKATGG
KDSVKVFGNS ALGSENDTID QVRIGALDMA RANGAAFNEI VPESMIPSLP FLFRDIDHFR
KVMYGPEGQK ILDAFKAKGM IALTFYESGA RSIYTKKPIH TPADMKGLKV RVQPSDLMVD
EIRAMGGTPT PMPFAEVYTG LKTGLVDAAE NNLPSYEETK HFEVAPVYSE TQHSMTPEVL
VFSKKVWDTL TPQEQEIIKK AAADSVPYYQ KLWTAREADA SKTVTKGGAT IVASTQIDRA
AFVKAMQPVW AKYEKTPQMK QLVDEIQAVK
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