| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4865 |
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| Symbol | |
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| ID | 6278664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 988328 |
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| End bp | 989917 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615952 |
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| Product | galactarate dehydratase |
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| Protein accession | YP_001888600 |
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| Protein GI | 187919569 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | [TIGR03248] galactarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0784645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0391217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAT CTCCGCTCTA CATTCGCGTT CACCCCAACG ACAATGTCGC GATCGTCGTC
AACGACGGCG GTCTGGGTGA GGGCGCGGTA TTTCCCGATG GTTTGGCGCT GCGCGAGCGC
GTGCCGCAAG GGCACAAGGT CGCGCTGGCC GACCTGGCCG AGGGCGACGA GGTCATCCGC
TATAACGTGG TGATCGGCTA TGCGCTGAAG GCGCTGCCGA AGGGCAGCTG GATCAACGAA
CACGTGATTC GCATGCCGAG TCCGCCTGGA CTCGAGGATC TGCCGATCGC GACGATCAAG
GCGCCGGACA TGCCGCCGCT CGAGGGCTAT ACGTTCGAGG GCTATCGCAA CGCGGACGGC
TCGGTCGGTT CGCGCAACAT TCTCGCCATC ACGACGACGG TGCAATGCGT GGCCGACGTG
GTTCAACACG CGGTGACGCG TATCAAGGCT GAACTGCTGC CTCGCTATCC GAATGTCGAC
GACGTGGTGA GCCTCGGCCA CACGTACGGT TGCGGCGTCG CGATCGACGC GCCCGACGCG
ATGGTGCCGA TCCGCACCGT GCGCAACATC AGCCTGAATC CGAATTTCGG CGGCGAGGTG
ATGATGGTCA GCCTCGGTTG CGAAAAACTG CAGCCCGAGC GCCTGATGCC GCCCGGCACG
ATCCCGATCG CCGCGGCCGC GAATGTCGCC GAAGTCGCGG ACATCGGCGA TATCGAGGCT
GATCTGAACG GCGACGTGGT CGTGCTGCAG GACGAATCGC ACGTCGGCTT CCAGTCGATG
ATCGAGTCGA TCATGAAGAT GGCCGACGGT CATCTGAAGC GTTTGAACAA TCGTCGCCGC
GAGACGTGTC CCGCGTCCGA TCTCGTGATC GGCGTGCAAT GCGGCGGCAG CGATGCATTC
TCCGGTCTCA CCGCGAATCC CGCCGTGGGC TACGCGACCG ATTTGCTGGT GCGTGCCGGC
GCCACGGTCA TGTTCTCCGA AGTCACCGAA GTGCGCGACG GCGTCGATCA ACTGACGGCG
CGCGCGGCCA ACCCGGAAGT CGCCGCGGCG ATCATCCGCG AGATGCAGTG GTACGACGAT
TATCTGAAGC GCGGCGGCGC GGATCGCAGC GCCAACACCA CGCCGGGCAA CAAGAAGGGT
GGCTTGTCGA ACATCGTCGA AAAAGCGATG GGCTCGATCA TCAAGTCCGG TAATTCGGCG
ATTTCCGGCG TGTTGTCGCC GGGCGAGAAG GTCAAACAGA AAGGCCTGAT TTACGCGGCC
ACGCCGGCCA GCGACTTTAT CTGCGGTACG CTGCAGGTCG CGGCGGGTAT CAACCTGCAC
GTGTTCACCA CCGGCCGCGG CACGCCGTAC AGCCTTGCCG AAGTGCCCGT CATCAAGGTC
GCGACGCGCT CGGATCTGGC GCGCCGCTGG CATGATCTGA TGGACATCAA CGCCGGCACC
ATCGCGACTG GCGAGTCGAC AATCGAAGAG GTGGGCTGGG AACTCTTCCG TCTGATGCTC
GACGTCGCCA GCGGCCGCAA AGAGACTTGC GCTGAGAAGC TCAAGCTCCA CAATGCGCTG
ACGCTGTTCA ATCCCGCGCC GGTGACCTGA
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| Protein sequence | MEQSPLYIRV HPNDNVAIVV NDGGLGEGAV FPDGLALRER VPQGHKVALA DLAEGDEVIR
YNVVIGYALK ALPKGSWINE HVIRMPSPPG LEDLPIATIK APDMPPLEGY TFEGYRNADG
SVGSRNILAI TTTVQCVADV VQHAVTRIKA ELLPRYPNVD DVVSLGHTYG CGVAIDAPDA
MVPIRTVRNI SLNPNFGGEV MMVSLGCEKL QPERLMPPGT IPIAAAANVA EVADIGDIEA
DLNGDVVVLQ DESHVGFQSM IESIMKMADG HLKRLNNRRR ETCPASDLVI GVQCGGSDAF
SGLTANPAVG YATDLLVRAG ATVMFSEVTE VRDGVDQLTA RAANPEVAAA IIREMQWYDD
YLKRGGADRS ANTTPGNKKG GLSNIVEKAM GSIIKSGNSA ISGVLSPGEK VKQKGLIYAA
TPASDFICGT LQVAAGINLH VFTTGRGTPY SLAEVPVIKV ATRSDLARRW HDLMDINAGT
IATGESTIEE VGWELFRLML DVASGRKETC AEKLKLHNAL TLFNPAPVT
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