Gene Bphyt_4862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4862 
Symbol 
ID6279923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp984680 
End bp985423 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID642615949 
ProductGntR domain protein 
Protein accessionYP_001888597 
Protein GI187919566 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.105448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAC CACTGGCATC CGCGGCACCG CCACGACGCG CGCGTAATCT TGCCGAGTTC 
GTCGTTAGCT ACGTGACCGA GCAAATCGCG TCCAACGCCT TGAAGCCCGG CGACAAACTG
CCGACCGAAT CGCAACTCAT GGTCACGCTG AGCGTGAGCC GCACCGTCAT TCGCGAGGCG
ATTTCGCGTT TGCAGGCGGG CAAGATCATC GAAACACGGC ACGGCATCGG CAGCTTCGTG
TTGGAGCCGC AGCGCGAAAA GCTCGGCATC GACATGGTGC CCGCCACTAC CTTGCGCGAC
GTGCTGTCGA TCCTGGAACT GCGCATCAGT CTTGAAACGG AATGTGCGGG TCTCGCCGCC
CAGCGCGCCA AGCCGGACGA CCTCGCGCGC ATGCGCGCCG CGCTCGACGC GATCGAAGCC
ACGCGTCATA ACGGGCTGGA CAGCGTCGAC GCCGATCTGC AGTTTCATAT CTCGGTGGCG
CGCGCCACCG GCAACCGCTA TTTCGTCGAC ATCCTCACGC AAATGGGCAG CGCGCTGATT
CCGCGCAACC GGCTCGACTC CGCCGGCATT GCGCGCGCGG AACCGGACGC GTATCTGTCG
CTCGTCAATC TCGAACACGA AAGCATTCTC GAAGCGATCA CGCGCCATGA TGCGGAAGGC
GCGCGCGCGG CGATGCGTAT GCATCTGTCC AATAGCCGCG AACGTCTGCG GCGGGCGAAC
GAAGCGGCAG ACGCGAACAG CTGA
 
Protein sequence
MATPLASAAP PRRARNLAEF VVSYVTEQIA SNALKPGDKL PTESQLMVTL SVSRTVIREA 
ISRLQAGKII ETRHGIGSFV LEPQREKLGI DMVPATTLRD VLSILELRIS LETECAGLAA
QRAKPDDLAR MRAALDAIEA TRHNGLDSVD ADLQFHISVA RATGNRYFVD ILTQMGSALI
PRNRLDSAGI ARAEPDAYLS LVNLEHESIL EAITRHDAEG ARAAMRMHLS NSRERLRRAN
EAADANS