| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4857 |
|---|
| Symbol | |
|---|
| ID | 6280493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 977334 |
|---|
| End bp | 978626 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642615944 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001888592 |
|---|
| Protein GI | 187919561 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0133188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.643957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA AGGGCATCCG CTGGTGGATG GTCAGTCTGG TCGCGGCCGG GCTCATTATC
AATTATCTCG CGCGCAACAC GCTGTCAGTC GCGGCGCCGG CGTTGATGAA AGACCTCCAC
ATCACCACGG AGCAGTATGC GCACGTGGTC GTGGCGTGGC AGCTTTGCTA TGCATTCATG
CAGCCGGTGG CGGGCTTCCT GCTCGATACC GTCGGCACCA AGATCGGCTT TGCGGCGTTC
GCGCTCGCCT GGTCGCTGGC GTGCGCCGCG GCGGCGTGGT CGACGGGCTG GCGCAGCCTT
GCGTTCTTCC GCGGCCTGCT CGGCATTGCG GAAGCGGCCG GGATTCCGGC CGGCGTCAAG
GCGACGAGCG AGTGGTTCCC CGCCAAGGAG CGCTCGGTCG CGATCGGCTG GTTCAACATC
GGCTCGTCGA TCGGCGCGTT GCTGGCGCCG CCGCTGGTGG TGTGGGCGTT GCTGCACGGC
GAATGGCAGT TGGCTTTCGT GATAGTCGGC GTGGCCGGGA TCGTGTGGAG CGTGCTGTGG
ATGGCGCTCT ACAAGCATCC GCGCAATCAG AAACTGCTGG GCGACGCCGA ACGCGACTAC
ATTCTGAGCG GTCAGGAAGC GAAGCACAGC GACGCGGGCG CCGCCAAGCG CAACTGGATC
GCCATGCTCG GCAGCCGCGA TTTCTGGGCG ATCGGCATTC CGCGTATTCT GTCCGAGCCG
GCGTGGCAGA CCTTCAACGC GTGGATTCCG CTGTACATGA TGACCGAGCG TCACATGAAC
CTGAAGGAAG TTGCGTTGTA TGCCTGGATG CCGTTTCTCG CGGCCGACAT CGGCTGCGTG
CTGGGCGGCT ATCTCAGCCC GCTGTTTCAC AAGTACGCCA AGGTGTCGCT GTTCACGTCG
CGCAAGATGG TGTTCGTGGT CGGCGCGCTG TTCATGATCG GACCGGCCTG CGTGGGCCTC
GTGGCGAGTC CTTATGTGGC GGTGGCGCTG TTGTGCGTCG GCGGTTTTGC GCATCAGACC
TTGTCGGGTG CGCTGTACGC GATCACGTCC GATATGTTCG GCAAGAACGA AGTCGCGACA
GCGACCGGTA TGGGCGGCAT GGCGGGTTAT CTGGGCGCGG CTGCGTTCAC TGCGCTGTTC
GGCGTGCTGG TTACGCAGAT CGGGTATAGC CCGCTGTTCG TGGTGCTGGC GGTGTTCGAT
ATTATCGCGG CCGGTGTGGT GTGTTTGCTG GCGAAGAGCG CGGACAAGAC GCCGGAGCCG
CGTTGGACGC CGGCGAGTGC GGTGGTCAAA TGA
|
|---|
| Protein sequence | MKIKGIRWWM VSLVAAGLII NYLARNTLSV AAPALMKDLH ITTEQYAHVV VAWQLCYAFM
QPVAGFLLDT VGTKIGFAAF ALAWSLACAA AAWSTGWRSL AFFRGLLGIA EAAGIPAGVK
ATSEWFPAKE RSVAIGWFNI GSSIGALLAP PLVVWALLHG EWQLAFVIVG VAGIVWSVLW
MALYKHPRNQ KLLGDAERDY ILSGQEAKHS DAGAAKRNWI AMLGSRDFWA IGIPRILSEP
AWQTFNAWIP LYMMTERHMN LKEVALYAWM PFLAADIGCV LGGYLSPLFH KYAKVSLFTS
RKMVFVVGAL FMIGPACVGL VASPYVAVAL LCVGGFAHQT LSGALYAITS DMFGKNEVAT
ATGMGGMAGY LGAAAFTALF GVLVTQIGYS PLFVVLAVFD IIAAGVVCLL AKSADKTPEP
RWTPASAVVK
|
|---|
| |