Gene Bphyt_4837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4837 
Symbol 
ID6278136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp952967 
End bp953758 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID642615924 
ProductABC transporter related 
Protein accessionYP_001888572 
Protein GI187919541 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.108273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTA CGGCACCCGT TGCACTGTCG GTCAAGAACA TTCACAAATC GTTCGGCGAT 
CACCATGTGC TCAAAGGCAT TTCGCTCGAC GCCCATCAAG GCGACGTGAT CTCGATTCTC
GGTGCGAGCG GTTCGGGCAA GAGCACGTTC CTGCGCTGCC TGAACCTCCT CGAAACGCCC
GACGATGGCT CGGTCTCGCT CGCCGGCGAA GAGCTGAAAA TGAAGCGCCG CGGCGACGGC
AAACTGCAAC CGAGCGACCG CCGCCAGGTG GACCGGGTGC GCTCGCAACT CGGCATGGTG
TTCCAGAACT TCAACCTCTG GTCGCACATG ACCGTGCTGG AAAATCTGAT CGAAGGGCCG
ATGCGCGTGC AAAAGCGCAG CCGCGCCGAA TCGGTGGAAG AGGCGGAAGC GCTGCTGGCG
AAAGTCGGTC TGGCGGAAAA GCGCGGTCAT TATCCGGCGC ATCTGTCGGG TGGCCAGCAA
CAACGCGTGG CGATTGCGCG CGCGTTGGCC ATGCATCCCA AAGTCATGCT GTTCGACGAG
CCGACCTCGG CGCTCGATCC TGAACTGGTG GGCGAAGTGC TGCGCGTGAT GCGCTCGCTG
GCCGAAGAGG GCCGCACCAT GCTGGTCGTC ACGCACGAAA TGGGTTTCGC GCGCCATGTA
TCGAATCGCG TGATGTTCCT GCATCAGGGG CAAGTGGAAG CCGACGGCAC GCCCGACGAA
GTGTTCGTCG AATGCAAATC GGACCGTTTC CGGCAATTCG TTTCGAGCCA TCAGGACCGC
ACCACCAACT AA
 
Protein sequence
MNATAPVALS VKNIHKSFGD HHVLKGISLD AHQGDVISIL GASGSGKSTF LRCLNLLETP 
DDGSVSLAGE ELKMKRRGDG KLQPSDRRQV DRVRSQLGMV FQNFNLWSHM TVLENLIEGP
MRVQKRSRAE SVEEAEALLA KVGLAEKRGH YPAHLSGGQQ QRVAIARALA MHPKVMLFDE
PTSALDPELV GEVLRVMRSL AEEGRTMLVV THEMGFARHV SNRVMFLHQG QVEADGTPDE
VFVECKSDRF RQFVSSHQDR TTN