| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4836 |
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| Symbol | |
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| ID | 6277988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 952179 |
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| End bp | 952931 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615923 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001888571 |
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| Protein GI | 187919540 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.14573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCG ACTTCGACTT TCTGTTCGAC ACGATCAAGC AACTGCTCGC GGCCGTGCCG
ACCACGCTCG GTCTGTTCTT CTGCTCGCTG ATTCTCGGCG GCCTGCTTTC GCTCGTGATC
GTCACGATGC GCGTGTCGCC GCACTGGCTG CCGAATCGCT TCGCGCGCGC TTATATCCTC
GTGTTCCGCG GCTCGCCGCT GCTGATCCAG ATGTTCCTCG TCTACTACGG CATGGGCCAG
TTCGGCGTGA TTCGCGAGAG CTTCCTGTGG CCGGTGCTGC GCGAGCCTTA CATGTGCGCG
GTGTTGTCGC TCGCGCTATG CACGGCCGGC TATACCGCCG AAATCATTCG CGGTGGCTTG
ATGGCGGTGC CGGTCGGTCA GATCGAGGCC GGTTATTCGA TCGGCCTGTC GGGTTTCGCG
CTGCTGCGCC GCGTGATCGG GCCGATCGCC TTGCGCCAGT GTCTGCCGGC GTATTCGACC
GAGGCGGTGC TGCTCGTCAA ATCGACGGCG CTCGCGAGTC TCGTCACCGT GTGGGAAGTG
ACGGGCGTCG CGCAGCAGAT CATCCAGCAA ACCTATCGCA CGACGGAAGT CTTCATCTGC
GCCGCGCTGA TCTATCTGTT CCTGAATTTT GTCATCGTGC GCTTGCTTGG CATGCTCGAA
ACGCGTCTGT CGCGCCATCT GCGCGCGGCG CGCCCGGCCG CGGTGAGCCG CCCGGTTTCC
GCCACCACCG AAGCACGCCG CGCCGCGCCG TGA
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| Protein sequence | MHFDFDFLFD TIKQLLAAVP TTLGLFFCSL ILGGLLSLVI VTMRVSPHWL PNRFARAYIL
VFRGSPLLIQ MFLVYYGMGQ FGVIRESFLW PVLREPYMCA VLSLALCTAG YTAEIIRGGL
MAVPVGQIEA GYSIGLSGFA LLRRVIGPIA LRQCLPAYST EAVLLVKSTA LASLVTVWEV
TGVAQQIIQQ TYRTTEVFIC AALIYLFLNF VIVRLLGMLE TRLSRHLRAA RPAAVSRPVS
ATTEARRAAP
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