Gene Bphyt_4830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4830 
Symbol 
ID6279187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp945462 
End bp946724 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content66% 
IMG OID642615917 
Producthypothetical protein 
Protein accessionYP_001888565 
Protein GI187919534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.109334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0898029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC CCAATTCACA CGCTACCGAC CAAATCGAAT CCCATGCTTT CGATCATGAC 
CGCAATCACC GCTTTGTGCG CAGGCACGGA GGCCCAATCG TGAACAATCC CTCGCGCAAG
TTTTCGCCGC GCGCCGCGCG GGTCCTCGCA TGGCCTTTGT TTGCCGCCGC TCTCGGCGCG
GCTGCATTGG TGAGCGCCGG CAGCGCGCAC GCCGAGCCGC AAGGTTTCCT CGAAACCGTC
AAGCACCACA CCACGCTGAT CAACACCGTG CCGGGCAACG GCGACCAGAA TCCGTACGCT
GTGGTGGTCG CGCCGGTCAC GGCGGGCACC GTCAAGCAAG GCGACGTACT GGTCGGCAAC
TTCAATAACT CAACGAATCT GCAGGGCACC GGCAGCACGA TCATCAACTA CCACCCGGAC
ACCAGGGAGA TGACGGTGTT CGCGACGGTG CCGCGCGATC TGAAGGAATG TCCGGGCGGC
ATCGGCCTCT CGACCGCGAT GACCATGCTC AAGTCCGGCT ACGTGATCGT CGGCAGCACG
CCGAGCAACG ACGGCACCAC CGGCACCAAG GGCGCCGGCT GTCTGATCGT GATCGATCCG
CAAGGCAAGG TCGCCGCGAC CATCAGTAGC CCGAACATCA ACGATCCGTG GGGCAACATG
GCGGTCGTCG ACAACGGCGG CAGCGCGACG CTGTTCGTCA GCATGGCCGG CTTCGGCGTG
GGCGGCGCGG ACGGCAATCC GCCGGTGTTC AAGCAGGCCA CCGTGCTGCG TCTGGACCTC
GACGTGCCGG CCGGCAAGCC GCCGGTCGTG AAGAAGGAAA CGGTGGTGGG CAGCGGCTTC
GGCGCGCAGG CCGACAAGGG CGTGTTCCTC GTCGGCCCGA CCGGCCTCGC GCTGTCGCCC
GATCAGAAAC TGCTGTACGT GTCCGACGCG ATCGGCAACC GCATCACCGA AATCGACGAA
CCGATGACGC GCGACACGAG CGCGGGCGTC GGCCGTCAAC TGACGGCCGA CGGCCTGCTG
CACCGGCCGC TCGCGATGGT GACCGCGCCC AACGGCCACC TGCTCGTCAC CAACGCGCTG
AACGGCCAGA TCGTCGAAAT CGATCCGGCC AGCGGCAAGC AGATCTACGC GCGCTGGATC
GACACCGACA AGGCGCAATC GCCGCCGGGC AACGGCGATC TGTTCGGCCT CGCGATGACA
CCTGAAGGCG ACGGTTTCTA CTACGTGCAG GACGACGTGA ACACGCTGGT GCTCGCGAAA
TAA
 
Protein sequence
MTAPNSHATD QIESHAFDHD RNHRFVRRHG GPIVNNPSRK FSPRAARVLA WPLFAAALGA 
AALVSAGSAH AEPQGFLETV KHHTTLINTV PGNGDQNPYA VVVAPVTAGT VKQGDVLVGN
FNNSTNLQGT GSTIINYHPD TREMTVFATV PRDLKECPGG IGLSTAMTML KSGYVIVGST
PSNDGTTGTK GAGCLIVIDP QGKVAATISS PNINDPWGNM AVVDNGGSAT LFVSMAGFGV
GGADGNPPVF KQATVLRLDL DVPAGKPPVV KKETVVGSGF GAQADKGVFL VGPTGLALSP
DQKLLYVSDA IGNRITEIDE PMTRDTSAGV GRQLTADGLL HRPLAMVTAP NGHLLVTNAL
NGQIVEIDPA SGKQIYARWI DTDKAQSPPG NGDLFGLAMT PEGDGFYYVQ DDVNTLVLAK