| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4825 |
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| Symbol | |
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| ID | 6279649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 939359 |
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| End bp | 940240 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615912 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001888560 |
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| Protein GI | 187919529 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0864247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0253512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCG AATTCGACGT CGATCTGCTG CGCACTTTCG TGGCGGTGGT GGAAACGGGC
AGCTTCACGA AGGCGTCGAC GACCGTGCAT CGTTCGCAGG CGGCGGTCAG TATGCAGATC
AAGCGGCTCG AAACCATGCT CGGCACGACG CTGTTCGCCC GCAATACACG CAATCTGTCG
CTCACGCGGC CGGGCAATAC GCTGCTCGAA TACGCGCGGC GTGTGCTGGC GTTGCATGAG
GAGGCGTGGT CGGCGATTGT TCGGCCGGAG GTGACAGGAA GAGTAGTACT CGGTGCGCCG
GACGACTACG TGTCGTCGCT GCTGTCGCCC GTTTTGCGGC GCTTTTCGAA TCTGTATCCG
CACGTGGAAA TCGAAATCGT CTGCGCGCAA AGCACGTCGC TCGCGCCCAT GCTCGCTGAC
AACAAGATCG ATCTTGCCTT CGTCACGCGC GACCGCAAGC TGCGCGGCGA ATTCGTGCGT
AGCGAGCCGA TGGTGTGGGT GGGGGCGTCG GTGGATACGC CGGTGCTGGC GGCGTCGCCG
CTGCCGGTGG GACTCTATGA GCCGGGCTGC GTGGCGCGCC AGCATACGCT GGCCGCGCTC
GACGGCGCGC GGATCCGCTA TCGCGCCGCG TTCAGCAGCG CGAGCCTGAT GGGACTGGTG
GCGACCGTGG ATGCGGGGTT GTCGGTGATT GCGCTCACGC GTTGCAGCGT GCCGCCACGG
TTCGCGATTC TCGGTGAAGC ACAGGGTTTG CCGAAGATCG CGCCGCTGGA AATCGTGGTG
GCGCGCAGCG CCAAATCGGA TCGTCCGACT TGCGATTATC TGGCCGCGCA GATGATGCAG
GATCTGTCGC AGCGGCCTCA GGCGCGTGGG GCTTCGGCTT AG
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| Protein sequence | MHPEFDVDLL RTFVAVVETG SFTKASTTVH RSQAAVSMQI KRLETMLGTT LFARNTRNLS
LTRPGNTLLE YARRVLALHE EAWSAIVRPE VTGRVVLGAP DDYVSSLLSP VLRRFSNLYP
HVEIEIVCAQ STSLAPMLAD NKIDLAFVTR DRKLRGEFVR SEPMVWVGAS VDTPVLAASP
LPVGLYEPGC VARQHTLAAL DGARIRYRAA FSSASLMGLV ATVDAGLSVI ALTRCSVPPR
FAILGEAQGL PKIAPLEIVV ARSAKSDRPT CDYLAAQMMQ DLSQRPQARG ASA
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