| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4808 |
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| Symbol | |
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| ID | 6278415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 921443 |
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| End bp | 922429 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642615895 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001888543 |
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| Protein GI | 187919512 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0657287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00223617 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAATA CACGACGCGC CGCATGTCGT GCGTTGGGCG CGCTCGCACT CTGCGCGGGC
TTCGGTGCGC TGACACTGGC CACGCCGGGC GCTTACGCGC AGGATAAACA GATTACGCTG
GGTTTTGCGC AAGTCGGCGC GGAAAGCGCA TGGCGAACCG CCAACACCGA GTCGATCAAG
TCAGCAGCGG CCGACGCAAA GATCAAGCTC AAGTTCTCCG ACGCCCAGCA GAAGCAGGAA
AACCAGATCA AAGCGATCCG CTCATACATC GCGCAGAAAG TCGACGTGAT CGCGTTCTCG
CCGGTCGTCG AGTCGGGCTG GGAACCTGTA CTGCGCGAGG CTAAAGCCGC GAAGATTCCG
GTGATTCTCA CCGACCGCAA CATCGATACG AAAGACACCT CGCTCTACGT GACGATGATC
GGCTCGGACT TCCTGGAAGA AGGCCGCCGC GGTGGTCATT GGCTCGAGGA TCACTTCAAA
AACGATCAAG GCCCGATCAA CATCGCTGAA CTTCAGGGAA CGGTCGGATC GGCGCCTGCC
AACGACCGGC ACTCGGGTCT CGTCGAAGTG ATCAAGAGCG ATCCCAAGTT CAAGATCATT
GCTTCGCAAA GCGGCGACTT CACGCTCGCC GGCGGCAAGC AGGTCATGGA AGCGTTTATA
AAGACATATG GAAATAAAAT AAATGTAGTT TATGCGCATA ACGACGATAT GGCGCTCGGC
GCCATCCAGG CGATGGAAGA GGCCGGCATG CATCCGGGCA AGGACATCAC CGTCGTTTCG
TTCGATGCGA CCAAGGGCGG CTTCCAGGCC ATGGCTGCGG GCAAGATGAA CGTCGATGTG
GAGTGCAGTC CGCTGCTGGG GCCGCAACTG ATGTCGGCGG TGAAAGATGT CGTGGCCGGC
AAGTCGCTGC CCAAGCGCAT CCTGACGGAA GAGACGGTAT TCCCGATGAG CGTCGCCGCG
CAGACATTGC CGACGCGCAA GTACTGA
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| Protein sequence | MANTRRAACR ALGALALCAG FGALTLATPG AYAQDKQITL GFAQVGAESA WRTANTESIK
SAAADAKIKL KFSDAQQKQE NQIKAIRSYI AQKVDVIAFS PVVESGWEPV LREAKAAKIP
VILTDRNIDT KDTSLYVTMI GSDFLEEGRR GGHWLEDHFK NDQGPINIAE LQGTVGSAPA
NDRHSGLVEV IKSDPKFKII ASQSGDFTLA GGKQVMEAFI KTYGNKINVV YAHNDDMALG
AIQAMEEAGM HPGKDITVVS FDATKGGFQA MAAGKMNVDV ECSPLLGPQL MSAVKDVVAG
KSLPKRILTE ETVFPMSVAA QTLPTRKY
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