Gene Bphyt_4802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4802 
Symbol 
ID6278991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp915913 
End bp916620 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content62% 
IMG OID642615889 
ProductMgtC/SapB transporter 
Protein accessionYP_001888537 
Protein GI187919506 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.167342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000205656 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCATTG AATTCGTCTG GCGGCTTCTC GCCGCCTTCG CTTGCGGCGT CGCGATCGGC 
CTCGAACGGC AGATGCGTCA GCGCAATGCA GGTTTGCGCA CCATCACGCT GGTCGCGAGC
GGCGCATGCC TGTTCGTCAC GCTCGGCGTA CTGACCGGCA ACGGCACAGC GGGCATCACC
CAGATCGCGG CGTACGTCGT CTCCGGCGTC GGCTTTCTCG GCGGCGGCGT GATCATGCGC
GACAAGGGTT CCATTCAGGG GATCAACACT GCGGCGACCT TGTGGTGCTC GGCCGCCGTG
GGCGTGTTGT GCGGCGCGGG CCATTACGGG CCGGCGCTCG CCGGAACCCT GGTCGTGCTA
TTGACCAACA CCGTGCTGCG CGAAGTCAGC CGTACGATCA ACGCGACGCC GGTATCGAAC
GCCGACCTGG TCCGCGAATA CGTGTTGACA ATCGTCTGCC GGGAAGCCGA CGAGATTCAC
ATTCGTACCG CCGTCTCCAA CTCCATGTAT TCGACGCCGC TGTCGTTTCA AAGCCTGACT
AGCGAGGACG TCGAAAACGA CCCAGGACGC ATTCGTGTTA CGGCGACGTT GAAGATGCAT
CCCAAGGATC AGTCGAAGCT CGAACAGATG GCCAGCCGCA TCAGCATGGA AAAGAGCGTC
TCCAGCGTCA GTTGGACAGC CAGAGAAGCG GAGCCTACGC CGGAGTAA
 
Protein sequence
MTIEFVWRLL AAFACGVAIG LERQMRQRNA GLRTITLVAS GACLFVTLGV LTGNGTAGIT 
QIAAYVVSGV GFLGGGVIMR DKGSIQGINT AATLWCSAAV GVLCGAGHYG PALAGTLVVL
LTNTVLREVS RTINATPVSN ADLVREYVLT IVCREADEIH IRTAVSNSMY STPLSFQSLT
SEDVENDPGR IRVTATLKMH PKDQSKLEQM ASRISMEKSV SSVSWTAREA EPTPE