Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4802 |
Symbol | |
ID | 6278991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 915913 |
End bp | 916620 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642615889 |
Product | MgtC/SapB transporter |
Protein accession | YP_001888537 |
Protein GI | 187919506 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.167342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000205656 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCATTG AATTCGTCTG GCGGCTTCTC GCCGCCTTCG CTTGCGGCGT CGCGATCGGC CTCGAACGGC AGATGCGTCA GCGCAATGCA GGTTTGCGCA CCATCACGCT GGTCGCGAGC GGCGCATGCC TGTTCGTCAC GCTCGGCGTA CTGACCGGCA ACGGCACAGC GGGCATCACC CAGATCGCGG CGTACGTCGT CTCCGGCGTC GGCTTTCTCG GCGGCGGCGT GATCATGCGC GACAAGGGTT CCATTCAGGG GATCAACACT GCGGCGACCT TGTGGTGCTC GGCCGCCGTG GGCGTGTTGT GCGGCGCGGG CCATTACGGG CCGGCGCTCG CCGGAACCCT GGTCGTGCTA TTGACCAACA CCGTGCTGCG CGAAGTCAGC CGTACGATCA ACGCGACGCC GGTATCGAAC GCCGACCTGG TCCGCGAATA CGTGTTGACA ATCGTCTGCC GGGAAGCCGA CGAGATTCAC ATTCGTACCG CCGTCTCCAA CTCCATGTAT TCGACGCCGC TGTCGTTTCA AAGCCTGACT AGCGAGGACG TCGAAAACGA CCCAGGACGC ATTCGTGTTA CGGCGACGTT GAAGATGCAT CCCAAGGATC AGTCGAAGCT CGAACAGATG GCCAGCCGCA TCAGCATGGA AAAGAGCGTC TCCAGCGTCA GTTGGACAGC CAGAGAAGCG GAGCCTACGC CGGAGTAA
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Protein sequence | MTIEFVWRLL AAFACGVAIG LERQMRQRNA GLRTITLVAS GACLFVTLGV LTGNGTAGIT QIAAYVVSGV GFLGGGVIMR DKGSIQGINT AATLWCSAAV GVLCGAGHYG PALAGTLVVL LTNTVLREVS RTINATPVSN ADLVREYVLT IVCREADEIH IRTAVSNSMY STPLSFQSLT SEDVENDPGR IRVTATLKMH PKDQSKLEQM ASRISMEKSV SSVSWTAREA EPTPE
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