| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4788 |
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| Symbol | |
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| ID | 6280198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 894037 |
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| End bp | 894792 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642615870 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_001888523 |
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| Protein GI | 187919492 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0478431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000516883 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGCAG AACAACGTCA CCAATACATC CTGGCGCAAG TCGCCAAAAC CGGCGCGCTC
TCGGTCGCGG AGCTGGTGCG CGAACTGAAC GTGTCGCGCG AGACCATTCG CCGTGACCTG
AACGCGCTGG CCGGGCGCGG CCTGCTGGTC ACGACTCACG GCGGCGCGTT GTCGAGCGAC
CGGCGCGAGC CCGACCTCGA TACACGCGAA GCCGCCAATG CCGGCGCGAA GCGCGCCATC
GGCGAGCGCG CGGCGGAGTT CGTGCCGGAC GGCGCGTCGC TGATCATCGA TTCGGGCAGC
ACCACGCAGG CGGTGGCGCG GGCGTTGCTC GACCGGCACC GTTTGTCCGT GTACACGAAC
GACTGGCGGA TCGCGCTGCT GCTCGGCCGC CGCAACGACA ACCGCATCAC GCTGCTGGGC
GGCGAGTTGT CCGACATAGA AGACGCCACC TTCGGGCTCG ATACCGTCCA CCAACTGACG
CAGTATCACG CGGACTTCGC CTTCATCGGC GCGGGCGGGA TTTCGCCGGA CGGCTATCTG
ACCGACTACA GCCGCATGGC CGCCGAGGTG CGCAGCCGCA TGATCGCCGC GGCGGACATG
GTGGTGGTGG TCGCCGATCA TTCGAAGTTC GGCCGTGTGA CGCCGGTGCG CATCAACGGT
ATCGAGTCGA CACGTTATCT GGTGACGGAG CTCGCGCCCG AACGCGCGCT CGGCAAGGCG
ATTGCGGCGC ATGGCCCGGA AATCCTGATC GCCTGA
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| Protein sequence | MLAEQRHQYI LAQVAKTGAL SVAELVRELN VSRETIRRDL NALAGRGLLV TTHGGALSSD
RREPDLDTRE AANAGAKRAI GERAAEFVPD GASLIIDSGS TTQAVARALL DRHRLSVYTN
DWRIALLLGR RNDNRITLLG GELSDIEDAT FGLDTVHQLT QYHADFAFIG AGGISPDGYL
TDYSRMAAEV RSRMIAAADM VVVVADHSKF GRVTPVRING IESTRYLVTE LAPERALGKA
IAAHGPEILI A
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