| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4779 |
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| Symbol | |
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| ID | 6280182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 885006 |
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| End bp | 886667 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615861 |
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| Product | peptidase S10 serine carboxypeptidase |
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| Protein accession | YP_001888514 |
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| Protein GI | 187919483 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.138285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00136432 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGAATA CCGAGTCAGC TTCTGTTAGT CCGCAGCCGT CGCACAATTC GCATGCTTCA
GGCGCGCCCG CGCCCGCGCC GGCCAGCGCG CCGCACAAGG CCAAAGATCA GCCGTTCTTC
GACCCGGTTG CTTACGGCAA CGGGCCGGAT GATTCCGTGA CCGAAACCGA TGAAAGCGCG
GCGATCACGC ACCACTCGGT CACCATCGGC GGGCACAAGA TCGACTACAC GGCGACGGCG
GGCCACCTCG TCATCGTCGA CCCGAGTAGT TCAAAGGCGG AAGCCCGCAT GTTCTACGTG
GCGTTCACGC AGGACAATCA GAAGGAAGAA GCCCGGCCGG TCACGTTCTT CTATAACGGC
GGGCCTGGGT CGTCGTCCGT TTTCGTGCTG CTGGGCTCGT TCGCGCCGCG CCGCATCAAG
ACGTCGATGC CGAGCTTCAC GCCACCCGCG CCGTATTCGA TGGAAGACAA CCCGGACAGC
CTGCTCGACA AGAGCGACCT CGTCTTCATC AACCCGGTCG GCACCGGCTA CTCGGCGGCG
ATCGCGCCGA AGAAGAACCG CGACTTCTGG GGCGTCGACC AGGACGCGGA CTCGATCAAG
CAGTTCATCA AGCGTTTTCT GACCAAGAAC AACCGCTGGA ATTCGCCGAA GTACCTGTTC
GGCGAGTCGT ATGGCACGGC GCGCAGTTGC GTGCTGGCGT ACCGTTTGCA CGAAGATGGC
GTGGATCTGA ACGGCATCAC GCTGCAATCG TCGATTCTCG ATTACACGCA GGCCGGCAAC
CCGGTGGGCG CGCTGCCCAC CGCGGCCGCG GACGCGTGGT ATCACAAGAA GCTCGGCATC
GCGCCGCGGC CGACCGACCT CGGCACGTTC GCCGAAGAAG TCGCGCAGTT CGCGCGCACG
GACTATCTGG CCGCGCTGCG TAAGTTTCCG ACCACCGACG CGGCAACGGT CGAAAAGCTC
AGCGAATACA CGGGCATCGA CAAAACGACC TTGCTCGCGT GGAGTCTGGA TGTCGCCTCG
TACGACAGCC GGGGCAATTC GTTGTTCCTC ACCACCCTGC TGAAATCCAA GGGTCTTGCG
CTCGGCGAGT ACGACGGCCG TGTGACGGCG ATAGGCACGG GCATTGCCGG CAAGATCGAC
CCGAATTCCG GCGGCAACGA CCCGACCATG ACGGCGGTGA CCGGCGTCTA CACGACGATG
TGGAACGTCT ATCTGAACGA GCAACTGAAG TACACGTCGA ATTCGTCGTT CACGGATCTG
AACGACCAGG CCTTCAAGTA CTGGGACTTC AGTCACATCG ATCCGACCGG CGCGCAGAAG
GGCGTCGACT CGAAGGGCAA CATCATTCTG TACACCGCCG GGGACCTGGC TGCCGTGATG
GCGCTCAATC CCGACCTGAA GGTGCTGTCG GCCAACGGCT TCTTCGATTT CGTCACGCCG
TTTTATCAGA CCGTGCTCGA TTTACAGCAA ATGCCGCTGC TCAGCCAGCA GGTCCGGCAG
AATCTGTCGG CGCGCTTTTA TCCGTCGGGG CATATGGTTT ATCTCGACGG CGGATCGCGC
ACCGCGCTGA AGGCCGATCT CGCGAAGATG TACGACACGA CGGTGTCCAA TACGCAGGCG
CTGCTTCGTA TCCGCGCATT GCAGGCGCGT GTGGCGCAGT AG
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| Protein sequence | MTNTESASVS PQPSHNSHAS GAPAPAPASA PHKAKDQPFF DPVAYGNGPD DSVTETDESA
AITHHSVTIG GHKIDYTATA GHLVIVDPSS SKAEARMFYV AFTQDNQKEE ARPVTFFYNG
GPGSSSVFVL LGSFAPRRIK TSMPSFTPPA PYSMEDNPDS LLDKSDLVFI NPVGTGYSAA
IAPKKNRDFW GVDQDADSIK QFIKRFLTKN NRWNSPKYLF GESYGTARSC VLAYRLHEDG
VDLNGITLQS SILDYTQAGN PVGALPTAAA DAWYHKKLGI APRPTDLGTF AEEVAQFART
DYLAALRKFP TTDAATVEKL SEYTGIDKTT LLAWSLDVAS YDSRGNSLFL TTLLKSKGLA
LGEYDGRVTA IGTGIAGKID PNSGGNDPTM TAVTGVYTTM WNVYLNEQLK YTSNSSFTDL
NDQAFKYWDF SHIDPTGAQK GVDSKGNIIL YTAGDLAAVM ALNPDLKVLS ANGFFDFVTP
FYQTVLDLQQ MPLLSQQVRQ NLSARFYPSG HMVYLDGGSR TALKADLAKM YDTTVSNTQA
LLRIRALQAR VAQ
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