Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4778 |
Symbol | |
ID | 6278952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 883376 |
End bp | 884935 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642615860 |
Product | Peptidase S53 propeptide |
Protein accession | YP_001888513 |
Protein GI | 187919482 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4934] Predicted protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0280801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00223617 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTCAATA AGCACCCGCT GCCAGGCAGT GAGCGAACAG TGGAACAGGG TTCGAAAGTC GTGGGGCAAT GCGATCCGGC GGAGCGGATC GAAGTATTCG TCATGTTGCG CCGTCAGCAG CAGGCGCAGT TCGACGCGTT GATGAGCAAG ATCGAAGCGG GCGATCCCAG TGTCAAGCCG CTGTCGCGCG AGACGCTCGC GAAGGACTAC GGCGCCGCGC CGGACGACAT CGCCAAGGTC AAGGCCTTCG CCGCCGCACA CGGTTTGACC GTGGTGCGCG AAGATCCGGC TGCGCGCACG GTCCTGCTGA GCGGCACGAT TGCCCAATTC CAGGACGCGT TCGCCGTCAA GCTCGAACAT TACGAACATC ACACGTCCGG CCAGTTCCGC GGCCGCACCG GCACGATCAG CGTGCCCGAC GATCTGCACG GCGTGGTGCA GGCCGTGCTC GGCCTCGACG ACCGCCCGCA GGCGCGGCCG CACTTTCGCA TCCGGCCGCC GTTCCAGGCG GCTCGCGGTC ATCAGGTTTC GTTCACGCCG CCGCAACTCG CCTCGCTCTA CCATTTTCCG CAAGGCGACG GCGGCGGTCA GTGCGTCGGC ATCATCGAGC TGGGCGGCGG GTATAACGCC AGCGATCTCA AGTCCTATTT CGCGAGCCTC GGCGTCGCCT CGCCCAAGGT AAAGTCGGTC GGCGTCGATC AGGGCAGCAA CCAGCCCACT GGCGACCCGA ACGGGCCGGA CGGCGAAGTC ACGCTCGACA TCGAAATTGT CGGCGCGATC GCCCCCGGGG CGGAGATCGC CGTGTATTTC ACGCAGAACA GCGACGCCGG CTTTATCGAC GCGGTGAGCC GCGCGGTGCA CGACACGACC AACAAGCCCT CGGTGATTTC GATCAGTTGG GGCGGGCCGG AGTCGAACTG GACCAGCCAG TCGTTGCAGG CCTTCAACAG CGTGCTGCAG TCGGCGGCAA CGCTTGGCGT GACGGTCTGC GCGGCCTCGG GCGACAGCGG TTCGAGCGAC GGCTCGGGCA GCGGCGATCA GGTCGACTTC CCGGCGTCGA GCCCCTATGT GCTGGCCTGC GGCGGCACGA GTCTCACCGC GTCGGGCACC TCGATCTCGC ACGAGGCGGT CTGGAACGAC GGCGCGCAAG GCGGCGCGAC CGGCGGCGGC GTGAGCCAGG CTTTCCCGGT GCCGGTGTGG CAGAAAGGCT TGTCCGCCAC GTCGACGAAG GGCGGCAAGA AAGCGCTCGG CGGGCGCGGT GTGCCGGACG TGGCGGGCGA CGCATCGCCG GTGACCGGCT ACAGTGTCCT GATCGACGGC ACGCAGACGG TGGTCGGCGG CACCAGCGCG GTTGCGCCGC TGTGGGCCGC GCTGATCGCG CGCATCAACG CGGCGAAAGG GCAGCCGGCC GGCTTCATCA ACCCCAAGCT GTATAAGGCG ACGGGCGCGT GCAACGACAT CACGCAAGGC AACAACGGCA GTTTCGCGGC GTCCCCGGGT TGGGATGCCT GCACGGGGCT CGGCAGTCCC AATGGTCAGA AGGTGGCGGC CGCACTATAG
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Protein sequence | MVNKHPLPGS ERTVEQGSKV VGQCDPAERI EVFVMLRRQQ QAQFDALMSK IEAGDPSVKP LSRETLAKDY GAAPDDIAKV KAFAAAHGLT VVREDPAART VLLSGTIAQF QDAFAVKLEH YEHHTSGQFR GRTGTISVPD DLHGVVQAVL GLDDRPQARP HFRIRPPFQA ARGHQVSFTP PQLASLYHFP QGDGGGQCVG IIELGGGYNA SDLKSYFASL GVASPKVKSV GVDQGSNQPT GDPNGPDGEV TLDIEIVGAI APGAEIAVYF TQNSDAGFID AVSRAVHDTT NKPSVISISW GGPESNWTSQ SLQAFNSVLQ SAATLGVTVC AASGDSGSSD GSGSGDQVDF PASSPYVLAC GGTSLTASGT SISHEAVWND GAQGGATGGG VSQAFPVPVW QKGLSATSTK GGKKALGGRG VPDVAGDASP VTGYSVLIDG TQTVVGGTSA VAPLWAALIA RINAAKGQPA GFINPKLYKA TGACNDITQG NNGSFAASPG WDACTGLGSP NGQKVAAAL
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