| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4773 |
|---|
| Symbol | |
|---|
| ID | 6280294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 880488 |
|---|
| End bp | 880955 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642615855 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_001888508 |
|---|
| Protein GI | 187919477 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0213128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0021999 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG ACCTCGATAA AACAGACCGC GCGATCCTCG CCGCGCTGCA GAAAGATGGC
CGCATGTCCA ACGCGCGGCT GGCCGAAACG GTCGGCCTGA GCGAAACGCC CTGCGCGCGT
CGCCTCAAGC GCCTCGAAAA CGACGGCTAC ATCGACCAGT ACCGCGCGAT GCTGTCGCGT
TCCGCGCTCG GCTTCGGCGT GGTCGCCTTC GTCTACGTGC GCTTTGCAGT GCACGACCGG
GCGGTGGCGA CACGTTTCGA GCGCGAGGTG CAGGCCATTC CGCGCATCCT GGCGTGTCAC
AACGTATCGG GCAGCGCCGA TTACATCCTG CAGGTGGTGG CCCGCGACCT CGACGACTAC
GGCACGTTCA TGCGCGACGA GATGCGCAGC CTGCCGGGCG TGACGTCGGT AGAATCGGCG
CTGTCGTTGC GCGAAGTGAA GGCCAACGGC GGCTTGCCGC TGTCCTGA
|
|---|
| Protein sequence | MTTDLDKTDR AILAALQKDG RMSNARLAET VGLSETPCAR RLKRLENDGY IDQYRAMLSR
SALGFGVVAF VYVRFAVHDR AVATRFEREV QAIPRILACH NVSGSADYIL QVVARDLDDY
GTFMRDEMRS LPGVTSVESA LSLREVKANG GLPLS
|
|---|
| |