| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4745 |
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| Symbol | |
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| ID | 6279119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 847733 |
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| End bp | 849241 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615827 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001888480 |
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| Protein GI | 187919449 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.222051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.460518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA CGATCTCCCC CACCCGACTG GCCGGCGCGA CGCTGGTGTT GTCGACCGTG
TTATCGGCGG TGTTGACAGG CGGCTGCACG GTCGGCCCCG ACTATCATCG CCCGCCCGTC
GCGACGCCGG CCGCGTGGAA AGAACTGCCT GGCTGGACCG AAGCGCAACC TGCCGCCGAG
GCTCCAAAAG GCGATTGGTG GACAGGCTTC AACGATCCGC TGATGGATGA GTTCGAACCG
CTCGTGTCGG TCTCGAACCA GACCGTGCGC CAAAGCTATG CGAACTACCA GCAGGCACTG
GCCGAAGTGC GGCTTGCGCG CAGCGCCCTG TTTCCGACGA TTGGCGTGAC CGGGTCGGCG
ACCCGCTCAC GTTCGTCGAC CGGCAATTTC AGCAGCGGCT CACTCGGCGG CCTTGCGGGT
GCGAGCAGTT TTCAGCGTAT CAACAACGCC GGCTCGCTCG AAGCCAACGC CAGTTGGGCG
CCCGACCTGT GGGGACTCGT GCGCCGCAAT ATCGAGGAGA GCGCCGCCAC CGCGCAAGCG
AGCCAGGCGA CGCTCGCGAA CGCCACGCTC TCCGAACAGA TCGCGCTGGC GAACGCGATC
ATCGATCTGC GCGTGACGGA TGCGAATATC GATCTGCTCA CTCACACGGT CGACGCGTTC
CAGCAATCTC TGCGCGTCGT CGCCGAACAG GACAGAGCAG GCACCGTGCC GCCGTCCGAT
CTGGTGAGCG CGCAGACACA ACTGGAGTCG GCGCAATCGA GTCTGATCGC GCTGGGCGTC
GCGCGCGCGC AGAACGTTCA TGCGATCGCC GTGCTGGTCG GCAAGAATCC GGAAGAGCTC
GACATCGCCC AGAACACCAC GCTGCCGACG CTGCCGTCCA TTCCGGTCAG CGTACCGTCC
ACGCTGCTGC AGCGCCGGCC CGACATTGCC GCCGCCGAGC GCCAGATGGC GGCGCAGAAC
GCCGCGATCG GCGTGGCCGT CGCCGCGTAT TACCCGACGA TTTCGCTGTC GGCGCTGGAC
GGCTTCACGC AGTCGCCGTT GGCCGGCCTG CTGCATATCG GCAACTATGT GTGGTCGTTG
GGCGGTCAGG CGACCGAGAC GCTGTTCGAC GGCGGCCAGC GCAGCGCGCA GGTCGATGCG
GCAAAAGCTT CGTATGAAGC GGCCGTGGCC AGTTATCGCG GCACGGTTTT GACGGCGTTT
CAAGGCGTGG AGAACGACCT GGCCGGCTTG CGCATCCTCG CGCAGCAATC CGAGGTGCTG
GAGCGCGCCG TGCGCGACGC GACACGCGGA ACCGAGATCG CGCGCAATGA ATATCAGGCG
GGGACGGTGG ACTTTACGAC GGTCGCGACT GCGCAAGCCA CTCAACTGAA TCTCCAGCAA
ACCGCTTTGA ACGTGCAGCA AACACGCTTG CTCGATGCGG CGTCGTTGAT CGGCGATCTG
GGAGGCGGCT GGTCGGATAG CGAACTGAGA GACCCACGCA AGCCGGGGCA GCAAAATGCG
TCGCCCTAA
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| Protein sequence | MMKTISPTRL AGATLVLSTV LSAVLTGGCT VGPDYHRPPV ATPAAWKELP GWTEAQPAAE
APKGDWWTGF NDPLMDEFEP LVSVSNQTVR QSYANYQQAL AEVRLARSAL FPTIGVTGSA
TRSRSSTGNF SSGSLGGLAG ASSFQRINNA GSLEANASWA PDLWGLVRRN IEESAATAQA
SQATLANATL SEQIALANAI IDLRVTDANI DLLTHTVDAF QQSLRVVAEQ DRAGTVPPSD
LVSAQTQLES AQSSLIALGV ARAQNVHAIA VLVGKNPEEL DIAQNTTLPT LPSIPVSVPS
TLLQRRPDIA AAERQMAAQN AAIGVAVAAY YPTISLSALD GFTQSPLAGL LHIGNYVWSL
GGQATETLFD GGQRSAQVDA AKASYEAAVA SYRGTVLTAF QGVENDLAGL RILAQQSEVL
ERAVRDATRG TEIARNEYQA GTVDFTTVAT AQATQLNLQQ TALNVQQTRL LDAASLIGDL
GGGWSDSELR DPRKPGQQNA SP
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