Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4736 |
Symbol | |
ID | 6280195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 838835 |
End bp | 840013 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642615819 |
Product | hypothetical protein |
Protein accession | YP_001888472 |
Protein GI | 187919441 |
COG category | [S] Function unknown |
COG ID | [COG4129] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.378543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.971977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCTTG CCGGCACGCT TGCTCAACTC TGCCGCACGG CCGTCTTCGG GCTCGGGCGC GAACTGGCGG CCTGGAAGGC TTCCCGAGCG CGCGCGACAT TCGCGGCTCA GGCAATGCTC TCAGTCGCGC TCTCTGTCGC GCTGGCGAAC TCGCTGGGTC TATCGGACAC CTGGTGGGCC GCAATCAGCG GCTTCGCGGT CATGCAAACA AGTTTTGCCG GCTCCGTGCA GCGTGCCGCA CACCGCATCA TCGGCACGGT GACAGGCGCC GCGCTGGGAG CCATCGCCGG CCCCTGGATC GGTGACCGAC CATGGGTGTT CGTGCCCGCG CTGGGGGCGA TCGGCGCTGT CGCGGTGTAT CGGGCCAACG GGTCCAAAGC GACCTACGCG TGGGTTCTGG GCGGCGTCAC GGCCCTGATG GTGACGTACG AAGCACACAA GTTCGCATCC TTCCGGGCGA CCGCTCTATT CGCTACGTTG CGCGTCGCCG AAGTCGCGGT TGGAACATTT GCTTGCCTGC TGGTGGCGAG CGTGTTTCAT TTCGGGCCGA AGTGGTATCG AAGGAACAGA ACGCCAACGG ACGCCACAGC CGCTCGCGTG GCGGGTGAGT CTGCGGGTCT GCCTGGCGCT GCGGAATCGA CGCCGCCACT GGAATCGGCG CGCTCGACCC GCATGCTGTT GTGCTTGCAG GCCGCGCTGT CCATCACAAC CCTTGCATCC CTGACTTATG TTCTGCATCT GCCGGGTTTC GCGCAAGCAA TGGTCACGGC AATCGCGGTG CTGGTGGTAC CGCCGGGTCT GACAGCGGAC AGAACGCGGC AGCCGGTCAT GGAAAAGATG GTGCAGCGCG TGGCCGGCTG CCTGCTGGCC GGTACGATCG GTGTGGCGCT GCTTCCTCTG ATGCAAGGGC AGGCAATCCT GTGCATGCTC GCGCTTTCCA TCGGCGTGTG GGCAGGATGT CACGTGCAAA CAGGACGGCA AGGCGCCAGC TACGTGGGCC GCCAATTCAC CATCGCGTTC ATCATGGTGT TTGTCCAGGA CCACCATTGG TCGTCCGATC CCATGCCTGC GCTCATGCGG CTATCCGGCA TTCTCACCGG GATTGTCGTG TTGGCAGCGG TGATGTTCGT GACCAGCCGG TTGTATATGC CGCCCATGCC TCAGGATGCG AGTCGTTAA
|
Protein sequence | MTLAGTLAQL CRTAVFGLGR ELAAWKASRA RATFAAQAML SVALSVALAN SLGLSDTWWA AISGFAVMQT SFAGSVQRAA HRIIGTVTGA ALGAIAGPWI GDRPWVFVPA LGAIGAVAVY RANGSKATYA WVLGGVTALM VTYEAHKFAS FRATALFATL RVAEVAVGTF ACLLVASVFH FGPKWYRRNR TPTDATAARV AGESAGLPGA AESTPPLESA RSTRMLLCLQ AALSITTLAS LTYVLHLPGF AQAMVTAIAV LVVPPGLTAD RTRQPVMEKM VQRVAGCLLA GTIGVALLPL MQGQAILCML ALSIGVWAGC HVQTGRQGAS YVGRQFTIAF IMVFVQDHHW SSDPMPALMR LSGILTGIVV LAAVMFVTSR LYMPPMPQDA SR
|
| |