Gene Bphyt_4736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4736 
Symbol 
ID6280195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp838835 
End bp840013 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content64% 
IMG OID642615819 
Producthypothetical protein 
Protein accessionYP_001888472 
Protein GI187919441 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.378543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.971977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTG CCGGCACGCT TGCTCAACTC TGCCGCACGG CCGTCTTCGG GCTCGGGCGC 
GAACTGGCGG CCTGGAAGGC TTCCCGAGCG CGCGCGACAT TCGCGGCTCA GGCAATGCTC
TCAGTCGCGC TCTCTGTCGC GCTGGCGAAC TCGCTGGGTC TATCGGACAC CTGGTGGGCC
GCAATCAGCG GCTTCGCGGT CATGCAAACA AGTTTTGCCG GCTCCGTGCA GCGTGCCGCA
CACCGCATCA TCGGCACGGT GACAGGCGCC GCGCTGGGAG CCATCGCCGG CCCCTGGATC
GGTGACCGAC CATGGGTGTT CGTGCCCGCG CTGGGGGCGA TCGGCGCTGT CGCGGTGTAT
CGGGCCAACG GGTCCAAAGC GACCTACGCG TGGGTTCTGG GCGGCGTCAC GGCCCTGATG
GTGACGTACG AAGCACACAA GTTCGCATCC TTCCGGGCGA CCGCTCTATT CGCTACGTTG
CGCGTCGCCG AAGTCGCGGT TGGAACATTT GCTTGCCTGC TGGTGGCGAG CGTGTTTCAT
TTCGGGCCGA AGTGGTATCG AAGGAACAGA ACGCCAACGG ACGCCACAGC CGCTCGCGTG
GCGGGTGAGT CTGCGGGTCT GCCTGGCGCT GCGGAATCGA CGCCGCCACT GGAATCGGCG
CGCTCGACCC GCATGCTGTT GTGCTTGCAG GCCGCGCTGT CCATCACAAC CCTTGCATCC
CTGACTTATG TTCTGCATCT GCCGGGTTTC GCGCAAGCAA TGGTCACGGC AATCGCGGTG
CTGGTGGTAC CGCCGGGTCT GACAGCGGAC AGAACGCGGC AGCCGGTCAT GGAAAAGATG
GTGCAGCGCG TGGCCGGCTG CCTGCTGGCC GGTACGATCG GTGTGGCGCT GCTTCCTCTG
ATGCAAGGGC AGGCAATCCT GTGCATGCTC GCGCTTTCCA TCGGCGTGTG GGCAGGATGT
CACGTGCAAA CAGGACGGCA AGGCGCCAGC TACGTGGGCC GCCAATTCAC CATCGCGTTC
ATCATGGTGT TTGTCCAGGA CCACCATTGG TCGTCCGATC CCATGCCTGC GCTCATGCGG
CTATCCGGCA TTCTCACCGG GATTGTCGTG TTGGCAGCGG TGATGTTCGT GACCAGCCGG
TTGTATATGC CGCCCATGCC TCAGGATGCG AGTCGTTAA
 
Protein sequence
MTLAGTLAQL CRTAVFGLGR ELAAWKASRA RATFAAQAML SVALSVALAN SLGLSDTWWA 
AISGFAVMQT SFAGSVQRAA HRIIGTVTGA ALGAIAGPWI GDRPWVFVPA LGAIGAVAVY
RANGSKATYA WVLGGVTALM VTYEAHKFAS FRATALFATL RVAEVAVGTF ACLLVASVFH
FGPKWYRRNR TPTDATAARV AGESAGLPGA AESTPPLESA RSTRMLLCLQ AALSITTLAS
LTYVLHLPGF AQAMVTAIAV LVVPPGLTAD RTRQPVMEKM VQRVAGCLLA GTIGVALLPL
MQGQAILCML ALSIGVWAGC HVQTGRQGAS YVGRQFTIAF IMVFVQDHHW SSDPMPALMR
LSGILTGIVV LAAVMFVTSR LYMPPMPQDA SR