Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4732 |
Symbol | |
ID | 6278885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 835349 |
End bp | 835894 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642615815 |
Product | protein of unknown function DUF336 |
Protein accession | YP_001888468 |
Protein GI | 187919437 |
COG category | [R] General function prediction only |
COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.718897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.662354 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGCGC CGCACGGTGT AATCATGAAA CGTTTTAGTC TGACCGCGTC GCTATGCATT GCGTCGCTTA TGTCGCCGGC GAGTCAGGCG CAAGAACCGC AGCCGTCCGG CTACCACTAC ACTTTGCCGC TCGACGTCGC GCTCGACGCG GCGAAAGAAG CGATTCGCGT GTGCGAAACG AAGCATTACT GGGTGACCGC TACGGTGCTC GATATGGATG GCGTGCCGCA GGTGGTACTG CGCGGAGACA GGAGCACGGT CCACACCGCC GAATCGAGCA TGCGTAAAGC CTTCACCGTT GTGACACTGG GGCCGGAATT CGGCTTCGAC CGGTCAAGTG GATTTTTCGA ACTGATGAAG ACGAGTCCAT ACGCACCGCA ACTCGCGACC GTGCACAACG TCATGGCGTT GCCGGGCGCG GTAGCGTTCA AAGTGAATGG AGAGATGGTG GGCGCGCTGG GTATCGGTGG CGCACCCGGG GGCGACAAGG ACGAAGTGTG CGCGGCGGCG GGCGTAGCGA AAGTCGCGGA CCGCCTGCCG CACTAA
|
Protein sequence | MTAPHGVIMK RFSLTASLCI ASLMSPASQA QEPQPSGYHY TLPLDVALDA AKEAIRVCET KHYWVTATVL DMDGVPQVVL RGDRSTVHTA ESSMRKAFTV VTLGPEFGFD RSSGFFELMK TSPYAPQLAT VHNVMALPGA VAFKVNGEMV GALGIGGAPG GDKDEVCAAA GVAKVADRLP H
|
| |