Gene Bphyt_4714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4714 
Symbol 
ID6278532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp810736 
End bp811872 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content63% 
IMG OID642615797 
Productglycosyl transferase family 4 
Protein accessionYP_001888450 
Protein GI187919419 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.149154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATC TTGCGTTTGG CTTTGTTGTC TCATTCCTGG TTATCTTTTT TATCGTGCGA 
AGTTCGGGGC TGCACGGGTC GCTGACGATG GATCACGACT TGCGCGGCAT TCAGAAGAAC
CACGCCTATG CAGTGCCACG AATCGGTGGG GTAGGAATTG CTTGCGCCGC CACTGTCATT
CCGCTCATCC AGCCGCTGTG GGCGACCGCG CCTGGCACGG GCCAACTGCT GCTCCTGTTG
TGCGCCGTGC CGGTGTTCGC GGGCGGCGTG ATCGAGGACA TGACCAAGCG CGTGAGCCCG
CGAGTGCGGC TGCTGTGCGC GCTCGCTTCG GCGCTCGCGG CCTGTCTGCT GATGCACGCA
ACGCTCACGC GGGTGGATTT GCAGCTCGTC GATCAGTGGC TGCGCATTGT GCCGATCGGC
ATCGGCTTCA CGATGCTCGG CGTGGCCGGG CTGACCAACG CGGTCAATAT CATCGATGGC
TTCAACGGAC TCGCCTCGGT GGTGACCATG CTGATCTTCG CCTCGATCGG CTACGTGGCC
CACAGCGTGA ATGACTGGCT CGTCATGAGC ATGGCGCTGA CCATGATCGG AGCGATCGGC
GGCTTCGTGC TCTGGAACTT TCCGGTGCCT TCCGTCTTCC TTGGCGACGG CGGAGCCTAT
TTCGTCGGTT TCATCATGGC GGAGCTGCTG GTGCTGCTGA TCGTGCGCAA CCCGGGCGTG
TCGGCGTGGT ACGCAATGGC CGTCGCGATC TATCCGACCT TCGAGACGCT CTTTTCCATC
TATCGCCGCA GGATTGTGCG CGGCAGGCCG GCGGGCGCTC CGGACGGGCT TCATCTGCAT
ACGCTCGTGT ATCGGCGTGT TGTGCGCAAG GGTATCGACG GCGGCAATCT GCGCCGCCGC
GCGATGCGTA ATTCCTGCAC CTCGGTCTAT CTGTGGGTGC TGAGCCTCGT GAGCATCGTG
CCGGCCACGT TCTTCTGGGA CACGCCTATC GCGCTCGCCG GAGCAGCCAT CGCCTTCGTC
ACGATCTACG TTCACATCTA CGTGGCGATC GTGCGCATGA GGACGCCGCG CTGGCTCGTG
ATCACGGGGC ACGCACCGGT CGTCGCGCCG CGGGGGGCCG AGGAGCCGCG CCACTGA
 
Protein sequence
MLNLAFGFVV SFLVIFFIVR SSGLHGSLTM DHDLRGIQKN HAYAVPRIGG VGIACAATVI 
PLIQPLWATA PGTGQLLLLL CAVPVFAGGV IEDMTKRVSP RVRLLCALAS ALAACLLMHA
TLTRVDLQLV DQWLRIVPIG IGFTMLGVAG LTNAVNIIDG FNGLASVVTM LIFASIGYVA
HSVNDWLVMS MALTMIGAIG GFVLWNFPVP SVFLGDGGAY FVGFIMAELL VLLIVRNPGV
SAWYAMAVAI YPTFETLFSI YRRRIVRGRP AGAPDGLHLH TLVYRRVVRK GIDGGNLRRR
AMRNSCTSVY LWVLSLVSIV PATFFWDTPI ALAGAAIAFV TIYVHIYVAI VRMRTPRWLV
ITGHAPVVAP RGAEEPRH