Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4676 |
Symbol | |
ID | 6280279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 772117 |
End bp | 773367 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642615762 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001888415 |
Protein GI | 187919384 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCG CCGACAGCAA ACGCTTCGCC CCCGCCTTCA ATCAGACGAC GCTCGTGATC CTCGCCGGCG CGCTCATTCT GAGCGCCGCG ATGGGGATCC GGCAGACCTT TGGCCTTTTC ATCGGGCCAT TCTCGTTCGA CCGCGGCTTG CCGGTCACGC TGATCGCATT CGCGATCGCG CTGCACAATC TCGTGTGGGG TTTCGCCCAG CCGTTCGCGG GCGCCGCCGC GGATCGCTAC GGCTCGGCGC CGGTGGTCGC GTTCGGCGCG ACGACATTCG CGGCGGGACT CGGCCTCGCG GCCGTGGCGC CCAGCGGCGC CATGCTGATC GTCGGCATGG GACTGCTGGT GGGAATCGGC GTGAGTTGCA CGACCTTCGG CGTGGTGCTG CCGGCGGTCG GCCGCATCGC TTCGCCGGAA AAACGCAGCA TGGCGATGGG GCTTGTCAGC GCCGGCGGCT CCGCGGGCCA GGTGCTGATG GTGCCGCTCG TACAAGGCAT CCGCCTCAGT TCGGGCATCG CAACGTCGCT CTTCGTCCTG GCTTTCCTGA TGCTGCTAAT CGCCCCGCTC GGCATGGTGC TCGACCGGCG CGCGCGGGTC GGCACGCCCG TTCAGGAAAC GCCCGCCGCG CCGCTTCGCA AGGTGCTGGG TCAAGCGGCC GGGCATCGCG GCTACCGGCT GCTGTCGCTC GGTTTCTTCA CTTGCGGGTT CCAGCTTGCC TTCATCGCCA CGCATCTGCC CGAATATCTG TCGCTTTGCC ATATGCCGAT CGGACTCGGC GCCACCGCGC TCGCGCTGAT CGGGCTGTTC AACATGGCGG GCAGTTGGGC CTGCGGCTGG CTGGGCGGCC GCTTCCGGCA GCACTATGTG CTCGGCTGGC TTTACGTGAT TCGCAGCGTG ACGATCGGCG CTTTCTTTCT CCTGCCGAAA AGCCCGGCGT CGGTAGTGAT CTTCGCGGCC GTGATGGGTC TGACCTGGCT CGGCACCGTG CCGCTCACGA GTGGACTGGT CGCGAAAGTG TTCGGCACGC GCCATCTCGG CAGCCTGTTC GGGGTCTGCT TTCTGAGCCA TCAGATCGGC TCGTTTCTCG GCGCGTGGCT CGGCGGTCTG GTGTTCGATC TGACGGGCTC GTATTCGCTG CTGTGGGAAG CGACGGTGGT CGCGGGCCTC GTCGCCGCCA TGCTGCACTT TCCGATCGAC GACACCGCCG TCAACACGCC CGCGCTTCGA GCCGAACCGG CGGCTGCGTG A
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Protein sequence | MSTADSKRFA PAFNQTTLVI LAGALILSAA MGIRQTFGLF IGPFSFDRGL PVTLIAFAIA LHNLVWGFAQ PFAGAAADRY GSAPVVAFGA TTFAAGLGLA AVAPSGAMLI VGMGLLVGIG VSCTTFGVVL PAVGRIASPE KRSMAMGLVS AGGSAGQVLM VPLVQGIRLS SGIATSLFVL AFLMLLIAPL GMVLDRRARV GTPVQETPAA PLRKVLGQAA GHRGYRLLSL GFFTCGFQLA FIATHLPEYL SLCHMPIGLG ATALALIGLF NMAGSWACGW LGGRFRQHYV LGWLYVIRSV TIGAFFLLPK SPASVVIFAA VMGLTWLGTV PLTSGLVAKV FGTRHLGSLF GVCFLSHQIG SFLGAWLGGL VFDLTGSYSL LWEATVVAGL VAAMLHFPID DTAVNTPALR AEPAAA
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