Gene Bphyt_4668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4668 
Symbol 
ID6278662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp765242 
End bp765793 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID642615755 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001888408 
Protein GI187919377 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.443743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATAG AAGTAGCGAC CCGTCTGCAA TACATCCGCA AGAAGAACGG CTTGTCCCAG 
CGTGAACTGG CGAAACGGGC GGGAGTGACG AACGGGACGA TCTCGCTGAT CGAACAGAAT
CGTGTGAGTC CCTCGGTGGG CTCGCTGAAG AAACTGCTTG AATGCATACC CATGAGTCTT
GCCGAATTCT TCACCTTCGA AGTGGAAGTG GAACGTTCGG TCGTGTCGCG CCGTGCCGAC
ATGCCGAACC TCGGCAATGA GTCGATCGAG TTCTATCTAG CGGGTTCAAG CGTGAAAGAT
CGCAACATGG GCATTCTGCG CGAGGTCTAT CAGCCGTTGT CGGACACGGG GCCGGAAATG
CTGGAGCACG AAGGGCACGA GGGCGGGGTG GTGGTCAGCG GTCAGATCGA ACTGACGGTG
GACGGCACCA CGTGGCTGCT CGACCCCGGT GACAGCTACT ACTTCGAAAG CCGTCTTCCG
CACCGTTTTC GCAATCCCAG CGCGGACCAT CTCTGCGAGA TCGTGTCGGC CAATTCGCCG
CCCACTTTCT AA
 
Protein sequence
MSIEVATRLQ YIRKKNGLSQ RELAKRAGVT NGTISLIEQN RVSPSVGSLK KLLECIPMSL 
AEFFTFEVEV ERSVVSRRAD MPNLGNESIE FYLAGSSVKD RNMGILREVY QPLSDTGPEM
LEHEGHEGGV VVSGQIELTV DGTTWLLDPG DSYYFESRLP HRFRNPSADH LCEIVSANSP
PTF