Gene Bphyt_4661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4661 
Symbol 
ID6277888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp756182 
End bp757093 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content59% 
IMG OID642615748 
ProductOrnithine carbamoyltransferase 
Protein accessionYP_001888401 
Protein GI187919370 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.535796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC CTAATAAGAC GCTTTCCAAT AGCGTGCTGA CGTTCGGATT TCTGTTTCTC 
TACATTCCGA TCATCAGCCT GATTGTGTAT TCGTTCAACG AATCGAAGCT CGTCACGGTG
TGGTCCGGCT TCTCGCTCAA ATGGTATGGC GCGCTGTTGC AAGACGGCGA GTTGCTGAAC
GCCGCGTGGC TTTCGCTGAA GATCGGTTTG TTGACCGCGT GCGCCTCGGT GGTGATCGGC
ACATGGGCCG GTTTCGTGCT CGCGCGCTTC GGACGCTTTC GCGGCTTTAC GCTGTTCGCC
GGCATGATCA ACGCGCCGCT CGTGATTCCT GAAGTGATTC AGGGCATCTC GCTGCTGCTG
TTGTTCGTCG CACTCGAACA GATGCTCGGC TGGCCGAAAG GCCGCGGCCT CTTCACGATC
TGGATCGGCC ACGTGATGCT GTGCGTGTCA TATGTGGCGA TCATCGTGCA ATCACGTGTG
AAAGAACTCA ACAGATCGCT CGAAGAAGCC GCGCTCGATC TCGGCGCGAC GCCCTTCAAG
GTGTTCTTCC TGATCACTCT GCCGCTGATC TCGCAGGCAC TGATGTCGGG CTGGCTGCTG
TCGTTCACGC TGTCTTTCGA CGACCTCGTG CTCTCCGCGT TTCTCTCCGG CCCCGGCTCG
ACCACGCTGC CGCTCGTGGT GTTCTCGCGG GTGCGTCTCG GCCTGAATCC GGAAATGAAC
GCGCTCGCCA CGATCTTCAT CACCACGGTG ACGATTGGCG TCATCGCCGT GAACCGCTGG
ATGCAATTGC GTGAACGCAA ACGCAATCGC GACATGCAGA TGGCTTTTGC CCTCGCCGAA
GCCGCCGACC CCTTGCCCGC CGCACCACAA CAAGCCGCCG CACGAAAGTC GCTCGATACG
GCACGCGCAT AA
 
Protein sequence
MIKPNKTLSN SVLTFGFLFL YIPIISLIVY SFNESKLVTV WSGFSLKWYG ALLQDGELLN 
AAWLSLKIGL LTACASVVIG TWAGFVLARF GRFRGFTLFA GMINAPLVIP EVIQGISLLL
LFVALEQMLG WPKGRGLFTI WIGHVMLCVS YVAIIVQSRV KELNRSLEEA ALDLGATPFK
VFFLITLPLI SQALMSGWLL SFTLSFDDLV LSAFLSGPGS TTLPLVVFSR VRLGLNPEMN
ALATIFITTV TIGVIAVNRW MQLRERKRNR DMQMAFALAE AADPLPAAPQ QAAARKSLDT
ARA