Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4653 |
Symbol | |
ID | 6278297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 745091 |
End bp | 746359 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642615740 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001888393 |
Protein GI | 187919362 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.268151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTA CCCAACGTGT TGCGACAGCG TCGCCGGTGA GCCAGACTTC GGTGTCGCAA GGCCGCTGGC TGCTTGTTTT CATCCTCGGT TATCTTGCGC TCATGGCCGA TGGCGCGGAC GTCATGATGT ACGGCCTCAC GCTGACGCGC ATCAAGGACG ACTTCGGACT GAGCAATGTC CAGGCCGGCG CATTGGGCAG CCTGACGTTG CTCGGCATGG CAGTCGGCGG GATTCTCGGC GGCTGGGCGA GCGATCGCAT AGGGCGGGTG AGGGTGGTGG TCTGGGCGCT GGCGCTCTTT TCGCTCGGCG CGGGGTTGCT TGGACTCACG CACAGCTTTG TGGAGTTCGC GATTGTCCGC TTCATCGGTT CGTTGGGCAT CGGCTCCATG GTGCTGGTCA CGACGCTGGT TGCCGAATAC GTGCCCACGG AGCGGCGCTC GCTGATTCTG GGCGCCTTGC AGACCGGTAT TTCGGCCGGC TATATCGTGG TCATTGCGCT GAGCAGCTGG ATTTTGCCGC ACTACGGCTG GCGCACGTTG TACTACGTGT CGGCGATACC CGTGGTGTTT GCTCTGGCAA TCAAATTCGC GGTGCCCGAG CCGGCTAGCT GGCGGGCGAG CCAGGCCATC GAGCGCACGA GTCAGCGCCG CTGGCGCGAC AGCCGCTATC ACGTGATTTT CAGCAATCGA CAGACGCGTA CCCTGTTTAT CCTGTGGACG CTGGCCTCGG TTTTCATTCT TTCCGGCTTC TACGGCTTGA ATAACTGGCT GCCAACGTAC CTCGAAAAAG AGCTGCATAT CAAGTTCAGC TCACTGACGG GGTACATGAT CGGGACTTAC GTCGTCGCGT TCATCGGCAA GATCTTCGCC GGCTGGCTGG GCGACCGTTG GAGCCGGCGC GGCGTGTATG TCCTCGGCTG CGTGGGCGCC GCGCTCTTTC TGCCGGTGAT CATCTTCTGG CACACGCGGG AGAACATCGC CGTTCTCATG CTTTTCTTCG GGTTTCTGTA CGGCGTACCC CTGGGCACGA TCGGCACGTT CATGTCCGAG AGTTTCGCCA CTTCCATTCG CGGCACTGCG GTGGGCGGGT CCTATAACCT GGGGCGTTTC TGCTCGGGGG CGGCGCCTAT CGTTATCGGT TTTCTGGCCA CGCAGTTTTC CATCGGTCTG GGCTTTCTCG TGGTCGGCGC GGTGTTCTTC CTGAGTGGCG TGACCGCGCT GTTCATCCCG GACCGCCTGT ACGACACGGA CCGGCCATCC ACGCCGTGA
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Protein sequence | MTTTQRVATA SPVSQTSVSQ GRWLLVFILG YLALMADGAD VMMYGLTLTR IKDDFGLSNV QAGALGSLTL LGMAVGGILG GWASDRIGRV RVVVWALALF SLGAGLLGLT HSFVEFAIVR FIGSLGIGSM VLVTTLVAEY VPTERRSLIL GALQTGISAG YIVVIALSSW ILPHYGWRTL YYVSAIPVVF ALAIKFAVPE PASWRASQAI ERTSQRRWRD SRYHVIFSNR QTRTLFILWT LASVFILSGF YGLNNWLPTY LEKELHIKFS SLTGYMIGTY VVAFIGKIFA GWLGDRWSRR GVYVLGCVGA ALFLPVIIFW HTRENIAVLM LFFGFLYGVP LGTIGTFMSE SFATSIRGTA VGGSYNLGRF CSGAAPIVIG FLATQFSIGL GFLVVGAVFF LSGVTALFIP DRLYDTDRPS TP
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