Gene Bphyt_4653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4653 
Symbol 
ID6278297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp745091 
End bp746359 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content62% 
IMG OID642615740 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001888393 
Protein GI187919362 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.268151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA CCCAACGTGT TGCGACAGCG TCGCCGGTGA GCCAGACTTC GGTGTCGCAA 
GGCCGCTGGC TGCTTGTTTT CATCCTCGGT TATCTTGCGC TCATGGCCGA TGGCGCGGAC
GTCATGATGT ACGGCCTCAC GCTGACGCGC ATCAAGGACG ACTTCGGACT GAGCAATGTC
CAGGCCGGCG CATTGGGCAG CCTGACGTTG CTCGGCATGG CAGTCGGCGG GATTCTCGGC
GGCTGGGCGA GCGATCGCAT AGGGCGGGTG AGGGTGGTGG TCTGGGCGCT GGCGCTCTTT
TCGCTCGGCG CGGGGTTGCT TGGACTCACG CACAGCTTTG TGGAGTTCGC GATTGTCCGC
TTCATCGGTT CGTTGGGCAT CGGCTCCATG GTGCTGGTCA CGACGCTGGT TGCCGAATAC
GTGCCCACGG AGCGGCGCTC GCTGATTCTG GGCGCCTTGC AGACCGGTAT TTCGGCCGGC
TATATCGTGG TCATTGCGCT GAGCAGCTGG ATTTTGCCGC ACTACGGCTG GCGCACGTTG
TACTACGTGT CGGCGATACC CGTGGTGTTT GCTCTGGCAA TCAAATTCGC GGTGCCCGAG
CCGGCTAGCT GGCGGGCGAG CCAGGCCATC GAGCGCACGA GTCAGCGCCG CTGGCGCGAC
AGCCGCTATC ACGTGATTTT CAGCAATCGA CAGACGCGTA CCCTGTTTAT CCTGTGGACG
CTGGCCTCGG TTTTCATTCT TTCCGGCTTC TACGGCTTGA ATAACTGGCT GCCAACGTAC
CTCGAAAAAG AGCTGCATAT CAAGTTCAGC TCACTGACGG GGTACATGAT CGGGACTTAC
GTCGTCGCGT TCATCGGCAA GATCTTCGCC GGCTGGCTGG GCGACCGTTG GAGCCGGCGC
GGCGTGTATG TCCTCGGCTG CGTGGGCGCC GCGCTCTTTC TGCCGGTGAT CATCTTCTGG
CACACGCGGG AGAACATCGC CGTTCTCATG CTTTTCTTCG GGTTTCTGTA CGGCGTACCC
CTGGGCACGA TCGGCACGTT CATGTCCGAG AGTTTCGCCA CTTCCATTCG CGGCACTGCG
GTGGGCGGGT CCTATAACCT GGGGCGTTTC TGCTCGGGGG CGGCGCCTAT CGTTATCGGT
TTTCTGGCCA CGCAGTTTTC CATCGGTCTG GGCTTTCTCG TGGTCGGCGC GGTGTTCTTC
CTGAGTGGCG TGACCGCGCT GTTCATCCCG GACCGCCTGT ACGACACGGA CCGGCCATCC
ACGCCGTGA
 
Protein sequence
MTTTQRVATA SPVSQTSVSQ GRWLLVFILG YLALMADGAD VMMYGLTLTR IKDDFGLSNV 
QAGALGSLTL LGMAVGGILG GWASDRIGRV RVVVWALALF SLGAGLLGLT HSFVEFAIVR
FIGSLGIGSM VLVTTLVAEY VPTERRSLIL GALQTGISAG YIVVIALSSW ILPHYGWRTL
YYVSAIPVVF ALAIKFAVPE PASWRASQAI ERTSQRRWRD SRYHVIFSNR QTRTLFILWT
LASVFILSGF YGLNNWLPTY LEKELHIKFS SLTGYMIGTY VVAFIGKIFA GWLGDRWSRR
GVYVLGCVGA ALFLPVIIFW HTRENIAVLM LFFGFLYGVP LGTIGTFMSE SFATSIRGTA
VGGSYNLGRF CSGAAPIVIG FLATQFSIGL GFLVVGAVFF LSGVTALFIP DRLYDTDRPS
TP