| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4649 |
|---|
| Symbol | |
|---|
| ID | 6279613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 740374 |
|---|
| End bp | 741030 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642615736 |
|---|
| Product | GntR domain protein |
|---|
| Protein accession | YP_001888389 |
|---|
| Protein GI | 187919358 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGA CAGCATTGGA AAGGTTGCTC GGCTATATCG CCCGCCATCA ACTCAAGGAC
GGCGACGCGC TGCCGCCCGA AAGAAAGCTG GCCGAAGACC TTGGCGTCAG CAGAAGGGAA
CTGCGCTCGG TGCTGGCTTC ACTGGAGGCG TCGGGCCGGG TGTGGCGCGG TGTCGGGCGC
GGCACCTATC TGGGCGCGCG GCCGCTGAAG TTCGGCCCCA CGCTGCGTGG ACTGCGCGCG
GGAACCAGCC CGGCGGACAT CGCCGAAATG CGGCTGCTGT TCGAGCCCGC GCTTGCGGAA
CTCGCCGCGA CCAAAGCGAG CCGGGACGAT CTGCTGGAAC TGGAAAAGTG CGCGCGCAAA
AACGCTGCCG CGAAGAACGA TGAAGAGTGG CAGCAATGGG ATCATCGCTT TCACTTACTG
ATTGGGCAGG CCACCCGCAA TCCCGCGCTC ATTGCGCTGA TGGAAGTCAT CAACAGCATG
CGCGTCAAAC CGGACGTACG TGAAAAGACG GTGGCTCAGG AGACCCGGCA GTATTTCGCC
CAGCAGCATC AGGCTGTCGT CAATGCAATG AAAGCGCGTG ATGGAGAGAC AGCGGCGCGC
TGCATGCGCG AGCATCTGCT GAGCGTTCAA GGGCGGGCAT CAGGTAAGGT GAGCTGA
|
|---|
| Protein sequence | MEQTALERLL GYIARHQLKD GDALPPERKL AEDLGVSRRE LRSVLASLEA SGRVWRGVGR
GTYLGARPLK FGPTLRGLRA GTSPADIAEM RLLFEPALAE LAATKASRDD LLELEKCARK
NAAAKNDEEW QQWDHRFHLL IGQATRNPAL IALMEVINSM RVKPDVREKT VAQETRQYFA
QQHQAVVNAM KARDGETAAR CMREHLLSVQ GRASGKVS
|
|---|
| |