Gene Bphyt_4639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4639 
Symbol 
ID6277739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp725956 
End bp727734 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content61% 
IMG OID642615726 
ProductGluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_001888379 
Protein GI187919348 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACGC AAACCAAACC GCACGTCGAC GCGGTGATCG TCGGCTTCGG CTGGACCGGT 
GCGATTCTCG CGAAAGAACT GACCGAAGCG GGCCTCAAAG TGGTCGCGCT CGAACGCGGC
GAGTATCGCG ACACCTATCC GGACGGCGCC TATCCGAACA CGATCGACGA GCTGACTTAT
AACGTCCGCA AGAAGCTCTT TCTCGACCTC TCCAAGACCA CCGTATCGAT CCGTCATGCG
CCGAACGATA CCGCCCTGCC GTATCGCCAG TTGGCCGCGT TCCTGCCGGG CGAAGGCGTC
GGCGGCGCGG GCCTGCACTG GTCGGGCGTG CATTTCCGCA TCACACCGGA AGAGCTGCGT
CTGAAGAGCC ACTACGAGGA ACGCTATGGC AAGCGCTTCA TTCCCGAAGG CATGACGATT
CAGGATTACG GCGTCAGCTA CGACGAACTC GAACCGCATT TCGACTTCGC CGAGAAAGTG
TTCGGCACCT CGGGCCAGGC GTACAAGGTC AACGGCAAGG TAGTGGGCGA CGGCAACATT
TACGAAGCGC CGCGTAGCGA TAATTTTCCG CTCGCCGCAC AACTGAACAC GTATTCGGCC
GAGCGCTTCG GCAAGGCCGC GCGAGAACTC GGATTGAATC CGTACCGTTT GCCATCGGCG
AATACGTCGG GGCCGTACAC CAACCCGTAT GGCGTGCAGA TGGGCCCGTG CAACTTCTGC
GGATTCTGCA GCGGCTACGC GTGCTACATG TATTCGAAGG CGTCGCCGAA TCTGAACATT
CTGCCCGCGC TGAAACAGTC GCCGAACTTC GAGTTGCGTT CGCGCTGCCA CGTGCTGCGC
GTCGAACTCG ACGATACGAA AAAGCGCGCC AAGGGCGTGA CGTATGTCGA TCCAGCGGGC
AACGAAGTGT TCCAACCGGC CGATCTGGTG ATCGTCGCGG CGTTCCAGTA TCACAACGTC
CATCTGCTTC TGCTCTCGGG TATCGGCAAG CCGTATGACC CGATCTCCGG CGAAGGCGTG
GTGGGCCGCA ATTTCGCGTA CCAGAACCTC TCGACCATCA CCGCGTTCTT CGACAAGGAC
ACCTTCACCA ATCCGTTCAT CGGTGCGGGC GGCAACGGCG TCGCGGTCGA CGACTTCAAT
GCCGACAACT TCGATCACGG CCCGCTGGGT TTCGTCGGCG GATCGCCGTT GTGGGTGAAC
CAGGCGGGCG CCAAGCCGAT CAGCGGCATT GCCACGCCGG CCGGCACGCC GAACTGGGGT
GCCGACTGGA AGAAGTCGGT GAAAGACCAC TACGCGCACA CCATTTCCAT GGATGCCCAC
GGCAGCAACA TGTCGTACCG CGACGTGTTC CTCGACCTCG ATCCGACCTA CCGCGATTCA
TACGGCCAGC CGCTGTTGCG CATGACCTTC GACTGGAAGG ACAACGACAT CAAGATGGCC
CGCTACGTGA CCGGCCAGAT GCAGAAGATC GCGCAGCAGA TGGGCCCCAA GTCGATCAAC
GTCTATACAC GCGAATTCGG CGCGCACTTC GACTCGCGCC GCTATCAGAC CACGCATCTG
GTGGGCGGCG CGGTGATGGG CACCGATCCG AAGACGAGCG TGCTGAACCG CTACCTGCAA
AGCTGGGACG TGCACAACGT ATTCGTGATG GGCGCCTCGG CGTTTCCGCA AGGCATCGGC
TATAACCCGA CCGGACTCGT CGCGGCGTTG GCTTACTGGT CGGCGCGAGC GATCCGCACG
CAGTATCTGA AGAACCCCGG GCCGCTGGTG AGCGTATGA
 
Protein sequence
MSTQTKPHVD AVIVGFGWTG AILAKELTEA GLKVVALERG EYRDTYPDGA YPNTIDELTY 
NVRKKLFLDL SKTTVSIRHA PNDTALPYRQ LAAFLPGEGV GGAGLHWSGV HFRITPEELR
LKSHYEERYG KRFIPEGMTI QDYGVSYDEL EPHFDFAEKV FGTSGQAYKV NGKVVGDGNI
YEAPRSDNFP LAAQLNTYSA ERFGKAAREL GLNPYRLPSA NTSGPYTNPY GVQMGPCNFC
GFCSGYACYM YSKASPNLNI LPALKQSPNF ELRSRCHVLR VELDDTKKRA KGVTYVDPAG
NEVFQPADLV IVAAFQYHNV HLLLLSGIGK PYDPISGEGV VGRNFAYQNL STITAFFDKD
TFTNPFIGAG GNGVAVDDFN ADNFDHGPLG FVGGSPLWVN QAGAKPISGI ATPAGTPNWG
ADWKKSVKDH YAHTISMDAH GSNMSYRDVF LDLDPTYRDS YGQPLLRMTF DWKDNDIKMA
RYVTGQMQKI AQQMGPKSIN VYTREFGAHF DSRRYQTTHL VGGAVMGTDP KTSVLNRYLQ
SWDVHNVFVM GASAFPQGIG YNPTGLVAAL AYWSARAIRT QYLKNPGPLV SV