Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4639 |
Symbol | |
ID | 6277739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 725956 |
End bp | 727734 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642615726 |
Product | Gluconate 2-dehydrogenase (acceptor) |
Protein accession | YP_001888379 |
Protein GI | 187919348 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACGC AAACCAAACC GCACGTCGAC GCGGTGATCG TCGGCTTCGG CTGGACCGGT GCGATTCTCG CGAAAGAACT GACCGAAGCG GGCCTCAAAG TGGTCGCGCT CGAACGCGGC GAGTATCGCG ACACCTATCC GGACGGCGCC TATCCGAACA CGATCGACGA GCTGACTTAT AACGTCCGCA AGAAGCTCTT TCTCGACCTC TCCAAGACCA CCGTATCGAT CCGTCATGCG CCGAACGATA CCGCCCTGCC GTATCGCCAG TTGGCCGCGT TCCTGCCGGG CGAAGGCGTC GGCGGCGCGG GCCTGCACTG GTCGGGCGTG CATTTCCGCA TCACACCGGA AGAGCTGCGT CTGAAGAGCC ACTACGAGGA ACGCTATGGC AAGCGCTTCA TTCCCGAAGG CATGACGATT CAGGATTACG GCGTCAGCTA CGACGAACTC GAACCGCATT TCGACTTCGC CGAGAAAGTG TTCGGCACCT CGGGCCAGGC GTACAAGGTC AACGGCAAGG TAGTGGGCGA CGGCAACATT TACGAAGCGC CGCGTAGCGA TAATTTTCCG CTCGCCGCAC AACTGAACAC GTATTCGGCC GAGCGCTTCG GCAAGGCCGC GCGAGAACTC GGATTGAATC CGTACCGTTT GCCATCGGCG AATACGTCGG GGCCGTACAC CAACCCGTAT GGCGTGCAGA TGGGCCCGTG CAACTTCTGC GGATTCTGCA GCGGCTACGC GTGCTACATG TATTCGAAGG CGTCGCCGAA TCTGAACATT CTGCCCGCGC TGAAACAGTC GCCGAACTTC GAGTTGCGTT CGCGCTGCCA CGTGCTGCGC GTCGAACTCG ACGATACGAA AAAGCGCGCC AAGGGCGTGA CGTATGTCGA TCCAGCGGGC AACGAAGTGT TCCAACCGGC CGATCTGGTG ATCGTCGCGG CGTTCCAGTA TCACAACGTC CATCTGCTTC TGCTCTCGGG TATCGGCAAG CCGTATGACC CGATCTCCGG CGAAGGCGTG GTGGGCCGCA ATTTCGCGTA CCAGAACCTC TCGACCATCA CCGCGTTCTT CGACAAGGAC ACCTTCACCA ATCCGTTCAT CGGTGCGGGC GGCAACGGCG TCGCGGTCGA CGACTTCAAT GCCGACAACT TCGATCACGG CCCGCTGGGT TTCGTCGGCG GATCGCCGTT GTGGGTGAAC CAGGCGGGCG CCAAGCCGAT CAGCGGCATT GCCACGCCGG CCGGCACGCC GAACTGGGGT GCCGACTGGA AGAAGTCGGT GAAAGACCAC TACGCGCACA CCATTTCCAT GGATGCCCAC GGCAGCAACA TGTCGTACCG CGACGTGTTC CTCGACCTCG ATCCGACCTA CCGCGATTCA TACGGCCAGC CGCTGTTGCG CATGACCTTC GACTGGAAGG ACAACGACAT CAAGATGGCC CGCTACGTGA CCGGCCAGAT GCAGAAGATC GCGCAGCAGA TGGGCCCCAA GTCGATCAAC GTCTATACAC GCGAATTCGG CGCGCACTTC GACTCGCGCC GCTATCAGAC CACGCATCTG GTGGGCGGCG CGGTGATGGG CACCGATCCG AAGACGAGCG TGCTGAACCG CTACCTGCAA AGCTGGGACG TGCACAACGT ATTCGTGATG GGCGCCTCGG CGTTTCCGCA AGGCATCGGC TATAACCCGA CCGGACTCGT CGCGGCGTTG GCTTACTGGT CGGCGCGAGC GATCCGCACG CAGTATCTGA AGAACCCCGG GCCGCTGGTG AGCGTATGA
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Protein sequence | MSTQTKPHVD AVIVGFGWTG AILAKELTEA GLKVVALERG EYRDTYPDGA YPNTIDELTY NVRKKLFLDL SKTTVSIRHA PNDTALPYRQ LAAFLPGEGV GGAGLHWSGV HFRITPEELR LKSHYEERYG KRFIPEGMTI QDYGVSYDEL EPHFDFAEKV FGTSGQAYKV NGKVVGDGNI YEAPRSDNFP LAAQLNTYSA ERFGKAAREL GLNPYRLPSA NTSGPYTNPY GVQMGPCNFC GFCSGYACYM YSKASPNLNI LPALKQSPNF ELRSRCHVLR VELDDTKKRA KGVTYVDPAG NEVFQPADLV IVAAFQYHNV HLLLLSGIGK PYDPISGEGV VGRNFAYQNL STITAFFDKD TFTNPFIGAG GNGVAVDDFN ADNFDHGPLG FVGGSPLWVN QAGAKPISGI ATPAGTPNWG ADWKKSVKDH YAHTISMDAH GSNMSYRDVF LDLDPTYRDS YGQPLLRMTF DWKDNDIKMA RYVTGQMQKI AQQMGPKSIN VYTREFGAHF DSRRYQTTHL VGGAVMGTDP KTSVLNRYLQ SWDVHNVFVM GASAFPQGIG YNPTGLVAAL AYWSARAIRT QYLKNPGPLV SV
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