Gene Bphyt_4624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4624 
Symbol 
ID6277966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp707830 
End bp708543 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID642615712 
ProductIsoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_001888365 
Protein GI187919334 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.213452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.986486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGA CGACACCTTT GCAAAACCAG CCACTCGCCG TCACTACCGA AGGCGCCACC 
CTGACCGGTG CCATGCCGGC GGAAACGGGC AATGCCGGCG GCTGGCGCGA GGCGGTGGTG
GAAGTAGCCG CGCGCGCGGG CGCGGCGACC ATGCTGAGTC TGTTCGCCTA TGCCGCGATC
ACGCAATGGC GCGCGGCGCC CTCGCGAATC ACGCTGTTAT TTCTGGTGGT TTCCGCATGT
TTCACGGTCG GACTGTCGCT CGTATCGCGG GTGCCCATGA GACGCGATTG GCGGCCGTTC
GCTTTCTTGT GTGCAATGGG CGGCACGTAC TATTTCCTCG CCGTGCGTCT CGCGCCCGGC
GTGCAGCTCG TGCCGGAGGC TGTGGGCGCC GCGCTGCAAC TGCTGGGGAT AGGCTGGCAA
CTGTTCGCCA AGGCGTCGCT GCGCCGCTCG TTCGGCATCT TGCCCGCCAA TCGCGGCGTC
GTATCGCGCG GTGCCTATCG TTTCATTCGG CATCCGATGT ACCTTGGTTA CTTCATCACC
GACATCGGCT TCCTGCTGGT GAACTTCGGC CTGCAAAACC TGCTGGTGTA CGGGTGCCAG
TTCGCGTTGC AGGTGGGGCG CATCGTGCGC GAAGAGCGGC TTCTCTCCGC GGATGAAGGC
TATCGGACCT ACAAGCGCCG CGTGCGTTAT CGCGTCATTC CGGGCCTGTT TTAG
 
Protein sequence
MTPTTPLQNQ PLAVTTEGAT LTGAMPAETG NAGGWREAVV EVAARAGAAT MLSLFAYAAI 
TQWRAAPSRI TLLFLVVSAC FTVGLSLVSR VPMRRDWRPF AFLCAMGGTY YFLAVRLAPG
VQLVPEAVGA ALQLLGIGWQ LFAKASLRRS FGILPANRGV VSRGAYRFIR HPMYLGYFIT
DIGFLLVNFG LQNLLVYGCQ FALQVGRIVR EERLLSADEG YRTYKRRVRY RVIPGLF