| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4616 |
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| Symbol | |
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| ID | 6279430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 699718 |
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| End bp | 700920 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615704 |
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| Product | putative pilus assembly protein CpaE |
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| Protein accession | YP_001888357 |
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| Protein GI | 187919326 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.984834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.399314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA CTCTTCTCGT TTCGTCCAGC GCCGAGCGTG CGCCGCACAT CGCGGCGCGT
CTCGAGGCAA GCGGCATTGC GTTTCGTCTG CGTACGCTGC ACGGTACAGC AAAGCAATTG
CGCGTGCACG CCGCGGCGAT CAGGAGCGCC GATCTGCTGA TCGTCGACGA CGCCGACCTG
GCGCCGCGCG ACCTGGGCGG CATCGAGGAG GTGTTGTCGC AGCTGCCGAA CCTGCATTGC
ATGCTGGTCA CCCCGGCGCC GTCCACGGCG CTGCTGATGG CGGCGATGCG GGTCGGCGTG
CGGCACGTGC TCTCCTGGCC GCTGAACGAC GCCGAGATCG CCGACGCGCT CGCTCACGTC
TCGGCAAAGA AACACGGCGG CACGCGCCGC GACGGCCGTG TGGTGTCGTT CACCTCCTGC
AAGGGCGGCA GCGGCACGAC ACTGATCGCC GTGAATCTCG CCTATGCATT GGCCGCCTTG
CGCGACAAGC GCGTGCTGTT GATCGACCTC AACCAGCAAT TCGCCGATGC GAGCCTGCTG
GTCGCCGACA AGGCGCCGCC CGCCACACTC GCCGACCTGT GCTCGCAGAT CGACCGGCTC
GACGCCGCTT TCTTCGAATC TTGCGTGATG CACGTACACG CGAATCTCGA CGTGCTGGCC
GGCGCGGGCG ATCCCGTCAA GTCGGGCGAA CTGCGCGCCG CGCATCTCGA ACGGATTCTC
ACGCTGGTGC GCGAGCAATA CGATGCGGTG CTGATCGACG TCGGCCAGAA CATCAATCCG
CTCGCGATTC ACGCGCTCGA TCACAGCGAC TCGATCTGCA TGGTGGTGCG GCAGAACATT
CTGTACCTGC ACGCGGGCCG CCGCATGCTC GACATTTTCA AGGAGCTCGG CTATCCGGCG
AGCAAGGTGA AAGTGATCGT CAACCAGTAC GACAAGAACG CGCGCATCAA CCTGGCGACG
CTCGAAGAAA CGTTCGGCGC AAAGGTCGCG CATCACTTGC CGCGCGACGA AAAGCAGGCC
ACGGAGGCGC TGAATCACGG CGTGCCGCTC GTGACCGGCG CAAAGGGCGG AGCGCTCGCC
CAAGGCATCT CGCAACTGGC CGCGCTGCTG TGGCCGTTGC CGGTTGCGGA GCGCAGGAGC
GTGCTCGGGC GCCTGTTCCA AAGCCGGCCG AATTCGCCGC CGCAGCTGAA GCCCGGCCAC
TGA
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| Protein sequence | MIDTLLVSSS AERAPHIAAR LEASGIAFRL RTLHGTAKQL RVHAAAIRSA DLLIVDDADL
APRDLGGIEE VLSQLPNLHC MLVTPAPSTA LLMAAMRVGV RHVLSWPLND AEIADALAHV
SAKKHGGTRR DGRVVSFTSC KGGSGTTLIA VNLAYALAAL RDKRVLLIDL NQQFADASLL
VADKAPPATL ADLCSQIDRL DAAFFESCVM HVHANLDVLA GAGDPVKSGE LRAAHLERIL
TLVREQYDAV LIDVGQNINP LAIHALDHSD SICMVVRQNI LYLHAGRRML DIFKELGYPA
SKVKVIVNQY DKNARINLAT LEETFGAKVA HHLPRDEKQA TEALNHGVPL VTGAKGGALA
QGISQLAALL WPLPVAERRS VLGRLFQSRP NSPPQLKPGH
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