Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4613 |
Symbol | |
ID | 6278122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 696668 |
End bp | 697477 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615701 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_001888354 |
Protein GI | 187919323 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.310892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGA TCGCGACGCT GGCGGGCCTC ACCGCGGTGG TGTTCGCCTC GCGCTGGATG GTCTCGCAGT CGTCGAATGC CACGACCAGA GTCGTGGTGG CGGCAGCCGA CATCAATCTG GGCCAGCGGA TCGGCCCGGA CTACCTCAAG CTCACCGACT GGCCGTCCAA TAGCGTGCCG CCCGGTTCGT ACTCCGACAT CCAGAAACTC GACGGCCGCG TGCTGAAGGA AAGCCTGCTG CGCGGCGAAC CGATTCTCGA TGCGAAGCTC ACGCCGGTCG GCACGCTCGG CGGGCTTTCC GCGGTGATCG GCGAAGGCAA GCGCGCCATC ACGGTACGCG TGAACGACGT GATCGGCGTG GCGGGCTTCG CGCTGCCGGG CAATTACGTC GACATCATCG TCAACACGCA AAAAGATGGC CGCGATCCAG GCGCAACGCG CGATCAGAAC ATCTCCAAGA TCGTGCTCGA AAAGATTCTC GTGCTGGCCG TCGCGCAGGA AGTGGGCCGC GACGAAACCA AGCCGAAGGT GGTCGACGCG GTGACGCTCG AAGTGTTGCC GGAACAGGCC GAGAAGATCG ACCTTGCGCG CAGCATCGGC ACGCTGTCGC TGGTGTTGCG TAACCAGATC GATCCGAAAG CGATCGACAC CGCCGGCGCC ACCAAGGCCA GCCTGCTGCA GACGCCGGTC GCCGTGGCGC CCGCGCCGGA ACCGAAGCCG GTGCATATCG TGCGCAAAGT CGCGGCGCAC GCGCCGGCCA ACTGTGTGCG GGTGCTCGAT GGCGCCGACG TAAGACAAGA ATGCTTTTGA
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Protein sequence | MLLIATLAGL TAVVFASRWM VSQSSNATTR VVVAAADINL GQRIGPDYLK LTDWPSNSVP PGSYSDIQKL DGRVLKESLL RGEPILDAKL TPVGTLGGLS AVIGEGKRAI TVRVNDVIGV AGFALPGNYV DIIVNTQKDG RDPGATRDQN ISKIVLEKIL VLAVAQEVGR DETKPKVVDA VTLEVLPEQA EKIDLARSIG TLSLVLRNQI DPKAIDTAGA TKASLLQTPV AVAPAPEPKP VHIVRKVAAH APANCVRVLD GADVRQECF
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