Gene Bphyt_4596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4596 
Symbol 
ID6278230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp680177 
End bp680971 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content62% 
IMG OID642615685 
Producthypothetical protein 
Protein accessionYP_001888338 
Protein GI187919307 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTT TGCCTCTCGC CGCCGCGGCC TTGTCGTTGT CTGCCGCCCT TTTCGCCTCT 
ACTGCCGCGA TGGCGCAAGA CGCTCAACCG CAAACCGCGC CCGTCCACAA CATCGTTCTC
GTACACGGCG CGTGGGTAGA CGGCTCCGGC TGGAAGCCGG TCTATGACAG GCTGACCAAG
GACGGTTATC ACGTCACCAT CGTGCAGGAG CCTCTGACAT CGCTCGACGA CGACGTCGCT
GCAACGAAAC GCGTGCTCGA TCAGCAGGAC GGTCCGACGA TTCTCGTGGC GCACAGCTAC
GGCGGCTCGG TCATCACTGA AGCCGGCGTG CACCCGAAAG TGGTGGGCCT GGTGTATGTG
GCCGCGCACG CGCCGGCCGT CGGCGAAGAC GAAAGCGACC TTGGGAAAGG CATGCCGAGC
TACACATCAA AGCAACCGGA CGCCATCATG AAGACCGGCG ATGGATACAC TTATCTGAAT
CCTGCGGATT TCGCGAAGGA TTTCGCTGCC GATCTGCCGC TCAAGCAAGC GCAGTTCGAA
TCGCATTCGC AAATCCTGAC GGCCGCGAAA GTCTTCTCGG CGCCGATGAC TGTTGCCGCC
TGGACGACCA AGCCGAGTTG GGGCATCGTG GCGGCCGACG ACAAGATCAT CAACCCCGAT
CTCGAACGCT GGTACTACGC ACGCGCGCAC AGCCATACGA CGGTGATCCC GGGCGCAAGC
CACTCGGTCT ATGAATCGCG GCCGAAAGAA GTGACAGCCG TCATCGAAGA CGCGGCGAAG
CACGTGCGGT CCTGA
 
Protein sequence
MKVLPLAAAA LSLSAALFAS TAAMAQDAQP QTAPVHNIVL VHGAWVDGSG WKPVYDRLTK 
DGYHVTIVQE PLTSLDDDVA ATKRVLDQQD GPTILVAHSY GGSVITEAGV HPKVVGLVYV
AAHAPAVGED ESDLGKGMPS YTSKQPDAIM KTGDGYTYLN PADFAKDFAA DLPLKQAQFE
SHSQILTAAK VFSAPMTVAA WTTKPSWGIV AADDKIINPD LERWYYARAH SHTTVIPGAS
HSVYESRPKE VTAVIEDAAK HVRS