| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4569 |
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| Symbol | |
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| ID | 6280053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 644955 |
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| End bp | 645869 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615659 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001888312 |
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| Protein GI | 187919281 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.988976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTAC AAGCGAACAC ACAACCGAAC GCACAAACGA ACGCACAAAC GAACTCACAG
GCAACGCCGC ATTCCTATCT GGTCGGCCTG ATCGGCGCGG GTATCGGCGG ATCGCTGACG
CCGGCCATGC ACGAGGAAGA GGGCAGCAAG CTCGGTTTGC ACTATGTGTA CCGCCGTATC
GACCTGGAAG CGCTGAAACT CGACGTCGCC GCGCTGCCCG ATCTGTTGAT GGCCGCCGAA
CGCATGGGCT TCAACGGTCT GAACATCACG TACCCGTGCA AGCAGGCCGT GATTCCGCTG
CTCGACGAGC TTTCCGACGA CGCGCGCGCA CTCGGCGCCG TCAACACGGT GCTGTTCAAA
GATGGCAGAC GCATCGGCCA CAACACCGAC TGGTCCGGTT TCGCGCGTGC GTTCCAGCGC
GGCTTGCCGG ACGTGTCGCT GGAACGTGTC GTGCAACTCG GCGCGGGCGG GGCCGGCGCA
GCAGTCGCGC ACGCCGCTCT GAACATGGGC GCGAAATCGC TGACGCTTTT CGACGTGGAC
GCCACGCGCG CCGCGTCGCT CGCCGACGAA TTGCAGAAGC GTTTTCCCGC CGCCGCCGTC
GGCGCCGGCA GTTCGCTCGC CGAATCGCTC GCAGCCGCCA ATGGCCTGAT TCACGCTACG
CCCACCGGCA TGGCGAAATT GCCCGGCTTG CCGTTGCCGG TCGAATTGCT GCACCGCGAT
CTGTGGGTCG CGGACATCGT CTATTTTCCG ATTCGCACCG CGTTGCTGCA GGCGGCCGAA
GCGCTCGGCT GCCGCACGCT GAGCGGTGGC GGCATGGCGG TGTATCAGGC GGTCGACGCC
ATGCGCATTT TCACCGGTCT CGAACCGGAC GCCGAGCGCG TCTACACCCA CTTTCAGTCG
TTGTTGCAAC GCTAA
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| Protein sequence | MNVQANTQPN AQTNAQTNSQ ATPHSYLVGL IGAGIGGSLT PAMHEEEGSK LGLHYVYRRI
DLEALKLDVA ALPDLLMAAE RMGFNGLNIT YPCKQAVIPL LDELSDDARA LGAVNTVLFK
DGRRIGHNTD WSGFARAFQR GLPDVSLERV VQLGAGGAGA AVAHAALNMG AKSLTLFDVD
ATRAASLADE LQKRFPAAAV GAGSSLAESL AAANGLIHAT PTGMAKLPGL PLPVELLHRD
LWVADIVYFP IRTALLQAAE ALGCRTLSGG GMAVYQAVDA MRIFTGLEPD AERVYTHFQS
LLQR
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